| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5368 |
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| Symbol | |
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| ID | 7380722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 366720 |
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| End bp | 367481 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648983 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547220 |
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| Protein GI | 222106429 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.813565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGAAC GGGGAGATGG CGGCATGAGC ACCTGGGCAA AGATTTTCAC CGCCATTCGC
GGCGGCGTCA ACGAGGTGGC AGAGGCTGCT GCCGATAGTC AGTCCATGCG TATTCTGGAT
CAGGAGCTTC GGGACGCCGA GCAGTCCTTG CGCCGGGCGC GCTCGGATTT GGCCGGGATC
ATGGCATCGA ACAAAAGTGT CATGCGCCGG CTGGAAGAGG CCCGCGCCAA GGAGCTGAAG
GATAGCGACA GTGCGCGCGC TGCCGTCAAT GCTGGCCGTA TGGACCTTGC CCAAGGCCTG
GCGCAGCGCA TCGCCACTAT CCGCGGCGAA ATTCAGCGCG ATGAAGAGGA ACTGAACCGT
CTGCTGCCGC GCCAGCAACA GATGCTGCGC ACCATCCAGG ACACCGAGGC GCGCATTACC
CAGATGAAGC GCGAAGTGGA AAATGTGAAG GCAAATGAAT CGCTGCTGCG GGCGCAATCG
GCCATTTCGC ATAGCCAGTC TGGCATCAAC ACCCGTCTTG GCAGTGCAGT GGAAAGCCTT
GAACGGATCA AGAAACGCCA GGAAATCACC GCTGGCCGTA TCGAGGCCGG TGCGGAACTG
GCGGCGCTGG AAAATGGCAG TGATCTTGAT CGTCAACTGC GGGAAGCGGG CATCGGTGGC
TCCAGCCAAT CGGCGGACGA TGTGCTGAAG CAGTTGATGG CCCCCAGCGG GTCCAGTGCC
CAGGTTCTTC TGCCTGCGCC CGCTGAGAAG CTTGAGCGCT AA
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| Protein sequence | MEERGDGGMS TWAKIFTAIR GGVNEVAEAA ADSQSMRILD QELRDAEQSL RRARSDLAGI
MASNKSVMRR LEEARAKELK DSDSARAAVN AGRMDLAQGL AQRIATIRGE IQRDEEELNR
LLPRQQQMLR TIQDTEARIT QMKREVENVK ANESLLRAQS AISHSQSGIN TRLGSAVESL
ERIKKRQEIT AGRIEAGAEL AALENGSDLD RQLREAGIGG SSQSADDVLK QLMAPSGSSA
QVLLPAPAEK LER
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