| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5328 |
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| Symbol | |
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| ID | 7380689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 330054 |
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| End bp | 331229 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648951 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547188 |
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| Protein GI | 222106397 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAC ATTCTCTAAA ACTGGCTGGA ATTGGAAAAA GCTTCGCGGC TGATGATATT
CTGAAGAATA TTGATCTCGA GGTGCATCCC GGCGAGTTCT TGTCGCTTGT TGGCATGTCC
GGCTGTGGCA AGTCGACCCT GTTGCGGATC ATCGCTGGGT TGGAGCGGCC CGATCGCGGT
CAGGTTCTGA TCGATAATTC GGATGTGACC GACATGGATC CGAGCGACCG CAATCTGGCG
ATGGTGTTCC AGTCCTATGC GCTCTATCCC CATATGACCG TGCGGCAGAA CATCGCCACA
CCGCTGCGGA TGCGGCGTTT GTCGCTTGCG GGTCGATTGC CGCTGATCGG GCGTCTGGTC
GCGCCTTCCG AGATTGTCAA GGACATCAAG CGCAGCGTTG AAGAGGCTGC GGAGACATTG
CAGATTGCGC ATCTTCTGGA CCGGAGACCT GCTCAGCTTT CAGGTGGCCA GCGGCAGCGT
GTGGCGCTGG CGCGGGCGCT GGTGCGTTCG CCTGCTGCCT TCTTGATGGA TGAGCCACTT
TCCAATCTCG ATGCCAAGCT TCGCGCCCAT ATGCGCGATG AGCTTGTCGG CCTGCATCGC
CGCCTTGGCG CTACCTTCAT CTATGTCACC CATGATCAGA TCGAGGCCAT GACCATGTCG
GATCGTGTCG CGCTGATGCA TGAGGGCCGC ATCGAGCAAT TGGGCACACC CGATGAACTG
TACCACCGGC CAGCGACATT GACGGTGGCG CGCTTCATAG GCACCCCATC AATCAACCTT
CTGCCTGTCA TGATCGGCAT GCAGGGACAG GTTACCGCTT TCGGAAAAGA CCTCGACCTG
CGGGCATTAG ACCAGGATGG CGGACCGGCA ACGCTTGGGC TTCGGGCAGA AGACCTGCGC
GTCCAAGATC TTAGGGCCCA AGATCTGCGT GCAAGCGGCA ACGGCTTTGC CGTGCGCGTC
CAGCGCAGCG AGACCCATGG CGCCGACCGG TTCGTAACCT GCCGCCTTAT CGATGATGAA
ACGGTCGTGG TGACCATGCG GCAAGGCGCG CGCGACGCCC TCGGTGCTGA TGCACATGGT
CTGATGACCA TTGGCTTTGC ACCTGAGCGT GCTCATCTGT TTGGCGCAGA TGGCACGCGC
TGCGCCGTTT CTATTCGTGA ACGGGTGGCG GCATGA
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| Protein sequence | MMQHSLKLAG IGKSFAADDI LKNIDLEVHP GEFLSLVGMS GCGKSTLLRI IAGLERPDRG
QVLIDNSDVT DMDPSDRNLA MVFQSYALYP HMTVRQNIAT PLRMRRLSLA GRLPLIGRLV
APSEIVKDIK RSVEEAAETL QIAHLLDRRP AQLSGGQRQR VALARALVRS PAAFLMDEPL
SNLDAKLRAH MRDELVGLHR RLGATFIYVT HDQIEAMTMS DRVALMHEGR IEQLGTPDEL
YHRPATLTVA RFIGTPSINL LPVMIGMQGQ VTAFGKDLDL RALDQDGGPA TLGLRAEDLR
VQDLRAQDLR ASGNGFAVRV QRSETHGADR FVTCRLIDDE TVVVTMRQGA RDALGADAHG
LMTIGFAPER AHLFGADGTR CAVSIRERVA A
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