Gene Avi_5292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5292 
SymbolmoaD 
ID7380660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp295553 
End bp296386 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID643648922 
ProductABC transporter nucleotide binding/ATPase protein 
Protein accessionYP_002547159 
Protein GI222106368 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAC CTTATCTGCG CGTCCGCGAT CTTAAGGTTG CCTTCCCCAC CAGGCAAGGG 
TCGTTCGCCG CTGTCGATGG TGTTGGGTTC GACCTTGCCA GAGGTGAAAT CCTCGCCCTT
GTTGGCGAAT CCGGCAGCGG CAAGAGCATG ACGTCGCTGT CGATCATGCG TCTTCTGCCC
GAGGCGGGGA CAATGTCAGG CACGATCCAG ATCGATGGGC AGAATATTGC CGGGCTTCAG
CGCCGTGACA TGGAAGATGT GCGCGGCGCC AAAATTGGCA TGATCTTCCA GGAGCCGATG
ACGTCGCTCA ATCCGGTCCT GACCATTGGT CGCCAGATGA GCGAAGGCTT GATCCGCCAT
AAGGGCATGG CGCGTCGTCT GGCGCTGGAG CACGCCATTG CCGCGCTTGA GGATGTCCGC
ATTCCCGATC CCCGGCGTAT TCTCGGCCAG TATCCGCATC AACTGTCCGG CGGGATGCGC
CAGCGCGTGA TGATTGCTGC TGCCCTGACC CTGAAACCCG GCGTGCTGAT TGCCGATGAG
CCGACCACGG CGCTCGACGT GACAGTCCAG GCGCAGGTGC TGGATCTGCT TGTTGATCTC
AAACTGCGCC ACCGGTCAGG CATTCTGTTG ATCACCCATG ACATCGGTGT GGTTGCCGAA
ACGGCGGATC GTGTCGCGGT CATGCGCGGC GGGCGCATCG TTGAAACCGG CTCGGTCGCG
CAAATTCTGT CTGCGCCGCA GCATGACTAT ACCAAAGCGT TGCTGGCCTC GCATCTGACC
GTAGAACGGG CCATGCAGCA GCGCCGCGAC AAGACAAAGG CCAATGCCAA ATGA
 
Protein sequence
MTEPYLRVRD LKVAFPTRQG SFAAVDGVGF DLARGEILAL VGESGSGKSM TSLSIMRLLP 
EAGTMSGTIQ IDGQNIAGLQ RRDMEDVRGA KIGMIFQEPM TSLNPVLTIG RQMSEGLIRH
KGMARRLALE HAIAALEDVR IPDPRRILGQ YPHQLSGGMR QRVMIAAALT LKPGVLIADE
PTTALDVTVQ AQVLDLLVDL KLRHRSGILL ITHDIGVVAE TADRVAVMRG GRIVETGSVA
QILSAPQHDY TKALLASHLT VERAMQQRRD KTKANAK