| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5288 |
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| Symbol | gatA |
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| ID | 7380656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 290717 |
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| End bp | 292138 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648918 |
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| Product | glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002547155 |
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| Protein GI | 222106364 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.836412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGTTAA GCGAATATCG AACCTATGAT GCAACTGGAT TGGCAGAGCT TGTTGCCAAG
GGTGAGGTTC AGCCAACCGA ACTGCTGGAA ACCGCGCTTG CCGGCGTAGC GGCGACCAAT
CCTGCATTGA ATGCCATTGT CGCAACATTC GAAGACGAGG CTCGCCGCTT CATAAAGGAA
GAGCTGAAGG ATGGCCCGTT CAAAGGCGTC CCTTTCGTTC TGAAGGACCT CACCGCGCAT
TATGCTGGAC AGCCAACGGG TGCTGGATGG CCGCCTCGCG CCTCTGTTAC GCCGCAGCAA
GACAGCGAAT TGGTGCGTCG CTTCAAGAAG GCCGGGCTTG TCACCTTTGC CAAGACAGCC
GTGCCGGAGC TGGCCATGGA CTGGACGACC CGTTCGCGGG CGCATGGCGT CACCAATAAT
CCATGGAATC CGGGTCGCAC GGCGGGGACG TCCAGCGGTG GCACCGCAGC GGCAGTTGCG
GCGGGCATCG TGCCGATGGG TCACGGCAAT GACGGCGGCG GTTCGATCCG TGTGCCATCC
TCCGTCTGTG GATGTTTCGG CATGAAGCCA AGCCGGGGCC GCAATCCGGT TGCGCCTGCG
GGAAGCACCT GGCAGGGCAT GCTGGTGGAA CATGCGCTAA CGCGGTCCGT CCGCGATAGC
GCCGCCCTTC TGGATGCGAC CGCCGGACCG CATAGAGGGC AATTCTTCAA CAGTCCCGCA
GGGGGGCAAT TCGCTGCCGA GGTGGGACGC GATCCGGGCA AGCTGAGAAT TGCCGTTTCG
ACCAGGGCAC CCTATGGCGC AGAAACCCAT GCCGATTGCA AGGCCGCGGT CGCTGAGACC
GTCAAGCTGC TTGAGAGCCT GGGTCATCAT TGCGAGCCTT TCGATATCGA CTTGCCTGAT
GACGGCTGGG ATGCTTTTGA GACTTATATT CTCGCCGAAT ACGCAACCGA CATGCGCCTT
GAGGAAGGTG TCCTCGGGCG CAAGCTGACA CAGGGTGATT TTCCGCAGAT GCTGTGGGAC
ATGATCGAGG CTGGAAACCG CATCAGCGCG GTCGGTGTCA ATATCGCCAC AACGCGCCTG
CATGAGGTGG CCTCAGCCGT TTCCTCGACG TTTAAAACCT TCGATCTCTT CCTGTCGCCA
ACGCTTGCTC AACCCCCACT TCCGCATGAG GCTTTTCCGG CTTCGACTTC GATGCGCGGA
CACTATGCGT TTTATCTGTC GTGGATGCCT TATACGCATA TCTTCAACGT CAATGGATCA
CCGGCCATGT CGGTGCCGCT CGTCTGGAAC GACGAAGGCC TGCCGATCGG CGTTCAGTTT
GCGGCTGCAC CGACCGGCGA AGGTCTGTTG TTCAGGCTTG CCGCGCAGCT GGAGGCCGCT
CGTCCATGGA GCAATCGGCG ACCGCAGATT TCGGTCGCAT GA
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| Protein sequence | MQLSEYRTYD ATGLAELVAK GEVQPTELLE TALAGVAATN PALNAIVATF EDEARRFIKE
ELKDGPFKGV PFVLKDLTAH YAGQPTGAGW PPRASVTPQQ DSELVRRFKK AGLVTFAKTA
VPELAMDWTT RSRAHGVTNN PWNPGRTAGT SSGGTAAAVA AGIVPMGHGN DGGGSIRVPS
SVCGCFGMKP SRGRNPVAPA GSTWQGMLVE HALTRSVRDS AALLDATAGP HRGQFFNSPA
GGQFAAEVGR DPGKLRIAVS TRAPYGAETH ADCKAAVAET VKLLESLGHH CEPFDIDLPD
DGWDAFETYI LAEYATDMRL EEGVLGRKLT QGDFPQMLWD MIEAGNRISA VGVNIATTRL
HEVASAVSST FKTFDLFLSP TLAQPPLPHE AFPASTSMRG HYAFYLSWMP YTHIFNVNGS
PAMSVPLVWN DEGLPIGVQF AAAPTGEGLL FRLAAQLEAA RPWSNRRPQI SVA
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