| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5282 |
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| Symbol | |
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| ID | 7381400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 282815 |
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| End bp | 283612 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648912 |
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| Product | ABC transporter |
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| Protein accession | YP_002547149 |
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| Protein GI | 222106358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGGC GGATCACCCT GACTCTTGGC CTCGCTGTCG GCTTCTTCTA TCTGCCGATC
ATCGTATTGG CGCTGTTTTC CTTCAATGCC TCCAGCCTGA TGGCCTTTCC CTTAAGCGGC
TTCACGCTGT CCTGGTACAA AGACCTGTTC AGCAATACGA CCTTTATCAA CGGCTTCCTG
ACCAGTTTCC TGATCTCCCA GCCGGTCGGC ATCCTGGCGG CCTTGATCGG ACTTTGCGCG
GCCCTGGCAC TTGCCTCGCC CAGGCTGGCC TTTCGCCCGG TCTTTATCTT TCTGATTGTC
CTGCCATTTC TGGTGCCGAA AACGGTGCTG TCAATTGCCC AGGCCATGCT GATGAACTGG
ATAGGACTGG GGCGCGGAGC AGCCGCTCTT ATCGCTGCGC AAACCTTGAT CGCCATCCCG
TTTGCCACCA CCATCATTGC CGCCACCGTC ATCCGCCTCG ACAAACGGCT GGAAGATGCC
GCCCGCGATC TGGGGGCCAC ACCTTGGCAA AGCTTTCGCC GGATCGTGCT GCCGCAGTTG
AAGGGCGCCA TCGGTGCTGC CTATTCCATT GGCGTTATTC TATCGCTGGC CGATCTGACC
ATCTCGATGT TTCTCGCCGG TCGCACCCAG CCGCTCTCGT TGATTATCGC CTCGCAATTC
CGGCGCGAGC TGAAGCCCGA CCTCAATGCC ATGCAGGTCG TGGTGCTTTT GCTGACAGCC
GTGATCGTCA TTGTCAGCGA GCTTTATCGC CGCAACCGGC ACAAACACAG TATTTCAGGA
CCCTCAGACC ATGCTTGA
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| Protein sequence | MNRRITLTLG LAVGFFYLPI IVLALFSFNA SSLMAFPLSG FTLSWYKDLF SNTTFINGFL
TSFLISQPVG ILAALIGLCA ALALASPRLA FRPVFIFLIV LPFLVPKTVL SIAQAMLMNW
IGLGRGAAAL IAAQTLIAIP FATTIIAATV IRLDKRLEDA ARDLGATPWQ SFRRIVLPQL
KGAIGAAYSI GVILSLADLT ISMFLAGRTQ PLSLIIASQF RRELKPDLNA MQVVVLLLTA
VIVIVSELYR RNRHKHSISG PSDHA
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