| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5252 |
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| Symbol | |
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| ID | 7381373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 247433 |
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| End bp | 248344 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648885 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547122 |
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| Protein GI | 222106331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAT TCCAGATTCG AGCGCATCGA CCGGCCCGGC CAATTCTTTA CCTCGCGCCG
GCAATCGCGC TGCTTGCCGT GTTTTTTCTG GCGCCGATCT TGGTCAACGC GGTGATCGCC
TTTACGGACA TGGGGTCGAA CCTTCGGGTT GGCCATTTCA CTTTGCAGAA CTTCGAGCGG
ATCGTCCAGC GTGACGCGCG GATCCCCATG GTGCTGCTGA CGACGCTGAT CTACGTCACG
GCGACACTCT TCATCTTCAA TGTCGGCCTC GGCGCGCTTT TGGCGATGAC CTCGACCGCT
ATCCCCGACC GGCTAGGTAA TTTCTTTCGC GGACTATGGC TTTTGCCGCG CATGAGCCCG
GCTGTGCTCT ATGGGATCTT GTGGATATGG ATCGCCGATC CAACGCCCTT AGGGCTGCTC
AACCAGGTGA CGGGCGCATT TGGCCTGCCG CCGGTCAATT TGCGCAACGA TTTTCCGCTG
CTGCTGGTCA TTCTGGCAAA TGGCGTTGTC GGGGCTTCTT TTGCGATGGT CATCCTGACC
TCGTCGATCC GCTCGATCCC TTCGCATCTC GCCCATGCGG CACGTGTCGA TGGTGCCAGC
GAATGGGGTG TTTTGCGTCA TGTCGTGGTG CCTGCGCTCG CGCAGCCGAT CCGCTTCATT
ACCATTTACC AGGCACTCTC CCTGATGACG ACCTATGAAT ATATCCTGCT GATCACCGGC
GGCGGCCCGC TCTACGATTC CACACCCTAC GCGCTCTATA TCTACCGGCG CGCGTTCGAA
AGCGGCGCCT ATGCCTATGG TGCGGCGCTG GCACTCGGCC TGATGGTCAT CGGCATTGCC
GTGACCTTGG TGCAATGGCG TGTCTCCAAC ATGCGCTCCA CCTTTGCCGC TCCAAAGATT
GAGGTGTTGT GA
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| Protein sequence | MSQFQIRAHR PARPILYLAP AIALLAVFFL APILVNAVIA FTDMGSNLRV GHFTLQNFER
IVQRDARIPM VLLTTLIYVT ATLFIFNVGL GALLAMTSTA IPDRLGNFFR GLWLLPRMSP
AVLYGILWIW IADPTPLGLL NQVTGAFGLP PVNLRNDFPL LLVILANGVV GASFAMVILT
SSIRSIPSHL AHAARVDGAS EWGVLRHVVV PALAQPIRFI TIYQALSLMT TYEYILLITG
GGPLYDSTPY ALYIYRRAFE SGAYAYGAAL ALGLMVIGIA VTLVQWRVSN MRSTFAAPKI
EVL
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