| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5216 |
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| Symbol | |
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| ID | 7381345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 213879 |
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| End bp | 215264 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648857 |
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| Product | nitrilotriacetate monooxygenase |
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| Protein accession | YP_002547094 |
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| Protein GI | 222106303 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.772157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAC GGCTTATATT CAATTGCTTC ACGATGAATG TTCCCTCGCA TATCTACCAC
GGGACATGGC GACATCCGAA CAATCAACTT GCTCACTTCA ATGAGTTCGA GACCTGGTCA
AAGCTGGCAA CAAAACTGGA AGAGGGGCGG TTCGACGCGA TGTTCTTCGC GGATATTCTT
GGCATCGATC CGGCCTATGA TGGCAAGTGG GATGCTTATT TCGAGCAAGG CCTCCATATG
CCTTGCAACG ATACCTTCAC CTTGTGCGCG GCCCTTGCAG GGGTGACGAA AAACCTTGGT
CTCGTTTTCA CTAGTTCGAT CCTGTCCGAG CATCCTTTCG CGTTTGCAAA GAAGGCCTCG
ACCCTCGACC ATATCAGCGG CGGCCGTATC GGTTGGAACA TTGTCACAAG CGTGACGGAC
AATGCCGCCC GCAACTTCGG TTACGACAAG ATCGTCCCGC ATGACCAGCG CTACGACTGG
GCGGACGAAT ATATGTCCGT TCTCTACAAG CTCTGGGAAG GGTCCTGGGA GGACGGCGCG
ATGATCGCGG ACCGTGAAAG CGGCGTGTTC AGCGATCACA CCAAAGTGCA TCGGATCAAC
CATGTCGGAG AGCGTTACAA GGTGCAGGGG CCGCATCTGG TCAGCCCCTC TCCGCAACGG
ACGCCGATGC TCTATCAGGC CGGTGCCTCC AAGCGTGGCA GCCAGTTCGC GGCGCAGCAT
GCAGAAGGAA CTTTCGTTCT CTATCCGAAT GTCGACGGTG CCCGGATCGG GATTGCTGGC
ACCAAGGCGG TGGCGGCGCA GGTGGGACGC GGTGCCGAAG ACCTCAAGTT CATTCAGGGC
CTGTCCTTTG TCGTCGGCAG CACGATGGAA GAGGCGGAGC GGAAGGCTGC GGAGATCGAC
GAATGGGTCA GCTATGAAGG CCTTGCCGCG CATGTCAGCC GCGACATGGG TGTCGATCTC
TCCAATCTCG ACCCGGACAA GCCGGTCGAT GAGTCCGGTC TCGATGGCCT GCAAGGTTAC
GCACGCATGA TCGAGATGGG CAAGCCCAAT GGCGAGAAGG CCACTGTCAA GGAGGTCGCA
AACGCGCTTT CCTACAATTG CCGCATTGTC GGCACGCCGG ACAGTATCGC CGACGAATTG
GCGCTTTGGC AGGATGCAGG TGTTGATGGC ATCAACATGA TCTGCCAATT GCATCCCGAC
ACCTATATCG ATTTCATCGA TCACGTCACG CCGGTCTTGC AGGACCGTGG CCTTGCCCAG
CGCGACTATG CCGAAGGTCC TTTACGGCAA AAACTGTTCG GTCACGGCCC GCGCCTTCCA
GACAACCATC CGGGTGCCGC ACATCGCGGT GCGTTTTCCC AATCCACTCA GGTTGCTGCT
GAATAA
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| Protein sequence | MRKRLIFNCF TMNVPSHIYH GTWRHPNNQL AHFNEFETWS KLATKLEEGR FDAMFFADIL
GIDPAYDGKW DAYFEQGLHM PCNDTFTLCA ALAGVTKNLG LVFTSSILSE HPFAFAKKAS
TLDHISGGRI GWNIVTSVTD NAARNFGYDK IVPHDQRYDW ADEYMSVLYK LWEGSWEDGA
MIADRESGVF SDHTKVHRIN HVGERYKVQG PHLVSPSPQR TPMLYQAGAS KRGSQFAAQH
AEGTFVLYPN VDGARIGIAG TKAVAAQVGR GAEDLKFIQG LSFVVGSTME EAERKAAEID
EWVSYEGLAA HVSRDMGVDL SNLDPDKPVD ESGLDGLQGY ARMIEMGKPN GEKATVKEVA
NALSYNCRIV GTPDSIADEL ALWQDAGVDG INMICQLHPD TYIDFIDHVT PVLQDRGLAQ
RDYAEGPLRQ KLFGHGPRLP DNHPGAAHRG AFSQSTQVAA E
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