| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5152 |
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| Symbol | |
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| ID | 7380953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 144962 |
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| End bp | 146326 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648806 |
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| Product | nitrilotriacetate monooxygenase |
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| Protein accession | YP_002547043 |
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| Protein GI | 222106252 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.669149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCCCA GAAAACAGAT CATCCTCAAT GCCTTCAACA TGAATTGCGT GGGGCATATC
AATCACGGGC TCTGGGCGCA TCCGCGCGAC CGTTCGCACG ACTATAAATC TCTTCGCTAC
TGGACTGATC TGGCCCGCAC ACTGGAGCGT GGTCTGTTCG ATGGGCTGTT TCTCGCCGAT
ATTGTCGGGG TCTACGATAT TTACCAGAAC TCGGTCGACC TGACATTGCG GGAATCGATC
CAGCTACCCG TCAACGATCC GATGCTGCTG GTATCTGGCA TGGCTGCTGT GACCGACAAT
CTTGGCTTCG GTATTACGGT GAATACCAGT GTTGAGGCGC CCTATACCTT TGCCAGGAAA
ATCTCGACGC TCGATCATCT CACCTCAGGC CGGATCGGCT GGAATATCGT CACCGGTTAT
CTCGACAGCG CCGCCAAGGC ATTGGGCAAG ACCGGCATGA CAGAGCATGA CGCCCGCTAT
GACCAGGCCG ATGACTATAT GGACCTGCTG TATAAGCTTT GGGAAGGCAG CTGGGAGGAG
GGGGCCGTGC GCCTCGACAA ACAGGCACGG ATATATGCCG ATCCTGCCAA GGTTCATAAG
GTGCAGCACA ACGGGCCCTA TTACCAGTCC GAGGGCTACC ATCTGAGCGA GCCCTCTATC
CAGCGTACGC CGGTACTCTA TCAGGCCGGC ACATCGGGCC GTGGCCGGAA ATTTGCCGCG
CGCCACGCCG AATGCGTGTT TATTGGTGCC ACGGACAAGG CCGCGGCGCG TAAAACCTCC
CAGGCTCTAA GGGAAGAGGT GGTTGCCGCA GGGCGCCGTC CTGATGATAT CAAGATCTTT
CTCGGTGTTA CTGTGGTGAC CGACAAAAGC CGGGAAGCCG CCGCCGACAA GCTGGCGGAT
TATCGCCGCT ATGCCAGCCC GGAAGCGGGC CTGGCGCATT TTTCGGCCGG AAGCGGTATC
GATCTCTCCC GCTACGAGCT TGATGATCCT ATCCAGTACG GCCCCACCAA CGCCATCCAG
TCCGTCACGC AGCTTGCCAA ACAGAAGGGT TGGACCAAGC GGCAATTGCT GAACGAGCTT
TCCATCGGCG GGCGCTATCC ACTGATCACC GGCGCGCCTG GCGAGGTGGC GGAGGAACTG
ATGTCCTGGA TCGATGAAGG CGATATCGAT GGTTTCAATC TCACCCGGAC CGTGACGCCG
GAGAGCTACG AGGATTTTAT CGAGTTTGTG GTGCCGGAAT TGCAAAGCAG GGGCGCTTAC
AAGACCAGCT ATGGTGACGG TTCCTTGCGC CATCGGCTGT TTGGCGAAGG CAACCGGCTT
CCCGCTCGCC ATGCCGGCAG CCTCTATCGA CACACGGAAA GGTAG
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| Protein sequence | MSPRKQIILN AFNMNCVGHI NHGLWAHPRD RSHDYKSLRY WTDLARTLER GLFDGLFLAD
IVGVYDIYQN SVDLTLRESI QLPVNDPMLL VSGMAAVTDN LGFGITVNTS VEAPYTFARK
ISTLDHLTSG RIGWNIVTGY LDSAAKALGK TGMTEHDARY DQADDYMDLL YKLWEGSWEE
GAVRLDKQAR IYADPAKVHK VQHNGPYYQS EGYHLSEPSI QRTPVLYQAG TSGRGRKFAA
RHAECVFIGA TDKAAARKTS QALREEVVAA GRRPDDIKIF LGVTVVTDKS REAAADKLAD
YRRYASPEAG LAHFSAGSGI DLSRYELDDP IQYGPTNAIQ SVTQLAKQKG WTKRQLLNEL
SIGGRYPLIT GAPGEVAEEL MSWIDEGDID GFNLTRTVTP ESYEDFIEFV VPELQSRGAY
KTSYGDGSLR HRLFGEGNRL PARHAGSLYR HTER
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