Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5106 |
Symbol | |
ID | 7380912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 92996 |
End bp | 93946 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643648765 |
Product | oxidoreductase |
Protein accession | YP_002547002 |
Protein GI | 222106211 |
COG category | [C] Energy production and conversion |
COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTT TCACCTTTGA GCGCGCGCCC TCGATCGAGG CCGCAGTGAA AACGGCTGCT GCCAACCCAG ACGCCAGGTT TATCGCCGGT GGCACCAACC TGCTCGATCT GATGAAACTC GAGATCGAAA CGCCAACTCA TATCATCGAT GTGAATGGAC TTGGTCTCGA TGAAATCGAA TCCACCGATG ACGGTGGTCT GCGCATCGGT GCTCTCGTGC GAAATACCGA TCTTGCCGCA CACATGACTG TTCGCCGCGA CTACGGTCTG TTGTCGCGAG CCCTGGTTGC CGGTGCCTCC GGCCAGCTTC GCAATAAGGC GACCACGGCC GGTAACCTGT TGCAGCGCAC CCGCTGTCCG TATTTCTATG ATCCGAACCA GCCGTGCAAC AAGCGTCAGC CGGGCAGCGG CTGCTCGGCC ATTGGTGGGT TCAGCCGTCA ACATGCGGTT GTCGGGGTAA GTGATGCCTG CATCGCCACC CATCCCAGCG ATATGGCAAT CGCCATGCGG GCGCTCGATG CGACCATCGA AACAGTAAAA GCAGATGGCA GCCGCCGGTC TATTCCGATT GCCGATTTCC ATCGTCTTCC GGGAGAGACC CCACATATCG AAAGCGTATT GGAGCGCGGC GAATTCGTGA CCGCTGTTCT GCTTCCACCA CCGATCGGCG GAAAGCATAT CTATCGAAAG GTCCGGGACC GGGCGTCCTA TGCGTTTGCG CTGATTTCAG TCGGCGCTGT CATTCAAGCG GATGGTACGG GGCGTGTTGC CGTCGGCGGT GTCGCTCATA AGCCCTGGCG GATCGAAGCC GCAGAAGCGG AACTGCCAAG AGGCGCTCGC GATGCGGCGA AAGCCATTCT CGCCGATGCC CGTCCGACTG AACAGAACCG GTTCAAGGTC GATCTTGTCG AGCGTACGCT TGGCGCCGTC CTTTCCGAAG CAAGGGGGTG A
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Protein sequence | MKAFTFERAP SIEAAVKTAA ANPDARFIAG GTNLLDLMKL EIETPTHIID VNGLGLDEIE STDDGGLRIG ALVRNTDLAA HMTVRRDYGL LSRALVAGAS GQLRNKATTA GNLLQRTRCP YFYDPNQPCN KRQPGSGCSA IGGFSRQHAV VGVSDACIAT HPSDMAIAMR ALDATIETVK ADGSRRSIPI ADFHRLPGET PHIESVLERG EFVTAVLLPP PIGGKHIYRK VRDRASYAFA LISVGAVIQA DGTGRVAVGG VAHKPWRIEA AEAELPRGAR DAAKAILADA RPTEQNRFKV DLVERTLGAV LSEARG
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