| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5070 |
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| Symbol | |
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| ID | 7381225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 62339 |
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| End bp | 63541 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648739 |
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| Product | Major facilitator superfamily permease protein |
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| Protein accession | YP_002546976 |
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| Protein GI | 222106185 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAA ACTATTGGGA ATTTTCCAGC CGCAATTGGC AGCATCTGAC ATTTGGCGCA
ATGCTTCTGG CCATTTCGAG TTTCGGCCAA ACCTATTTCA TTTCGATCTC AGGGGCGCAT
TTTCGAGACG CTTTTCGTTT AAGTGACGGT GGCTTGGGGA CTGTCTATGC AATAGGCACG
TTTTTAAGCG CCTTGACACT CACCTGGGCC GGGCGCCTGA TCGACTACAC AACGGTAAGA
GCGTTCAGTT GGGCGGTGGC CGTTCTGCTG GCTTGCGCAT GTGGATTGGT GTCGTTCAGC
CCCAATGTCT ATGTGCTCCT ACTTGCGTTC TACCTCCTGC GCCTGGGCGG CCAGGGCTTG
ATGGTTCATA CGGCGCTGAC TGCAACAGCC CGCACGTTTC CAGCAGATGC GGGTAAAGCG
CTCGGCATTA TCGCTCTGGG CATGTCTGTC GCGCAGGCTA CTTTTCCACT GGCCGGAGTG
ACGATGAACG ACACGTTCGG TTGGCGTGCA TCCTGGGCTA TCAACGCGCT CTTTGTCATC
GCCGCTGTCG GCGTAGCACT CACGGTCTTG CCAAGGGCGG GCGATCGGCC TTTGCGTCAG
CGCAGGCCTA AAGGACAGGC CTCAACCGAG CCCAGGCGGA CATCCTTGTT GCTCGACCGA
CGGCTCCTCA TGACCCTGCC AGCTGTTCTG GCAAGCCCCT TCATCGTTAC AGGCTTCTTC
TTCCATCAAG GCCGCCTGGC GGAGCAGAAG CACTGGGACA TCACATGGCT CGCTGCCGGA
TTTGTGGTCT TTGCCATTGT ACAGGCGGTC TCCGTCGTGG TGATTGGTCC GGTTATCGAC
CGTTTTGGAA CGAAGCGAAT TCTGCCTTAT TTTCTCTTGC CACAAGCCAT TGGAATGCTT
GCATTGGGAT TGCTTTCCTC GTCATGGGTT GCGCTGGTCT ATATGGTTCT AATGGGCATA
TCCTCCGCCT TCGGGTCCAC GCTTGCCACC GCGCTTTGGG TCGAACTTTT TGGAGCCAAT
GAGCTGGCAC GCGTGCGCTC TGCGGTCGAA GCCGGATCTG TTATAGCAAG CGGTGCTTCA
CCTGTGATCA TGGGATTGCT GATTGATGCC GGCTTTCCTT TGTCATGGCA GGCGCTGGCG
TGCTGTGCAT ACACAGTGTT GGCCTCCATT ATCGCAATCG GTGTGCAGCG TGTGAAAGTC
TGA
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| Protein sequence | MIKNYWEFSS RNWQHLTFGA MLLAISSFGQ TYFISISGAH FRDAFRLSDG GLGTVYAIGT
FLSALTLTWA GRLIDYTTVR AFSWAVAVLL ACACGLVSFS PNVYVLLLAF YLLRLGGQGL
MVHTALTATA RTFPADAGKA LGIIALGMSV AQATFPLAGV TMNDTFGWRA SWAINALFVI
AAVGVALTVL PRAGDRPLRQ RRPKGQASTE PRRTSLLLDR RLLMTLPAVL ASPFIVTGFF
FHQGRLAEQK HWDITWLAAG FVVFAIVQAV SVVVIGPVID RFGTKRILPY FLLPQAIGML
ALGLLSSSWV ALVYMVLMGI SSAFGSTLAT ALWVELFGAN ELARVRSAVE AGSVIASGAS
PVIMGLLIDA GFPLSWQALA CCAYTVLASI IAIGVQRVKV
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