| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5054 |
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| Symbol | vdh |
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| ID | 7381211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 45882 |
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| End bp | 47408 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648725 |
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| Product | vanillin: NAD oxidoreductase |
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| Protein accession | YP_002546962 |
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| Protein GI | 222106171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.619044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGG AACGGTCCGC AACACCTGGA AATTCCAGCC TGGACTGGAT GGATATGGCA
AGTGGCACTC CCACGCCTTT TGCAGCCTCC CTGCTGATCG GAGGAAAGTC CGTCAACGCG
CAAGGAGACA GGGTCTTTAC AAGAGCCAAT CCCCTGACCT CGCAAATCGT CACGGTGGCC
GCCGCCGCAA GTCTTGCGGA TGCCGAAAAC GCAGCACTTG CTGCTGCTGC TGCCTTTCCT
GGCTGGTCAG CATCGCCTTG CGCCATGCGC AAGACTATTC TGGAACAAGC AGCCATCCTG
CTGATCGACG CCGCCGAGAT TTTTACCCGG ACAATGATGG CCGAAACGGG AGCCACCCGT
GATTGGTGCC GTTTCAACAT CGACTATGGA GCAAAGATCT TCCAGGACGC CGCCGCCATG
GCCGTGCATG TGCCGGGATC GATTTGCCCG GATGATTTGA TCGTTGGAGC GTCCTTTTCA
TTGCGCCAAC CGGCTGGCGT CTGCCTCGCC ATCTCGCCTT GGAATGCGCC AATCCTGCTT
GCTGTCCGTT CGATTGCCTT GGCACTGGCC TGCGGCAATT GCGTGATCCT GAAAAGCTCG
GAATTGGCGC CCGCCACGCA GCGGTTGCTG GGCGATCTGC TTCAGCAAGC CGGTCTGCCC
GATGGCGTTT TGAATATCAT CTCCAATGCG CCTGCCGATG CAGCGGCGAT TGTCGAAACC
CTGATTGCCC ATCCCGTTGT TCGCCGGGTG AATTTCACCG GCTCAACGCG GGTCGGCAAG
ATCGTTGCGC AAATCGCCGC CCGCCATTTA AAGCGCTGCC TGCTGGAACT TGGCGGCAAA
GCGCCGCTGA TCGTGCTTGA TGATGCAGAC CTCGAACAGG CCGCCCGCGC CGCAACCTTC
GGGGCGTTTT TCAATCAGGG TCAGATCTGC ATGTCCACCG AGCGGATCAT TCTGGTCGAT
GCCATCGCCG ATGATTTTCT GTCGCTGTTC ATCAGTAAAG CGAAAACCGT CAAGGCAGGC
GACCCGGCAC TTGGCCTGAC ACCGCTTGGT TCATTGATCT CGGTAGAGTC CGGCCGGAGA
ATTGCAGGCA TGATCGATGA TGCCGTTGCC AGGGGCGCGC ATGTTCTGGC AGGCGGGCGC
GTTCACGACA CGTTGATGGA TGCCACTGTT GTCGATCATG TCCTGCCCGG CATGCGGCTC
TATCGTGAAG AAAGTTTCGG ACCGGTCGTG TCGATTATTC GCGTCACAGA CGCCGACGAG
GCCGTGACCG CCGCCAATGA TTGCGAGTAC GGCTTATCCG GCGCAGTATT CAGCCGCGAC
CTGCACCGCG CCCTCGACGT CGCACGGCGG GTGGAAACCG GCATTCTCCA TATCAACAGC
GCTACCGTGG CAGACGATCC GCTCATGCCG TTTGGAGGCG TCAAGGCCTC CGGCTATGGC
CGGTTCGGCG GCGTGGCGGC ACTGGACGAA TTTACCGAAT TGCGGTGGGT GAGCCTTGCC
TCAGGCCCGG CAGATTATCC GATCTGA
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| Protein sequence | MAMERSATPG NSSLDWMDMA SGTPTPFAAS LLIGGKSVNA QGDRVFTRAN PLTSQIVTVA
AAASLADAEN AALAAAAAFP GWSASPCAMR KTILEQAAIL LIDAAEIFTR TMMAETGATR
DWCRFNIDYG AKIFQDAAAM AVHVPGSICP DDLIVGASFS LRQPAGVCLA ISPWNAPILL
AVRSIALALA CGNCVILKSS ELAPATQRLL GDLLQQAGLP DGVLNIISNA PADAAAIVET
LIAHPVVRRV NFTGSTRVGK IVAQIAARHL KRCLLELGGK APLIVLDDAD LEQAARAATF
GAFFNQGQIC MSTERIILVD AIADDFLSLF ISKAKTVKAG DPALGLTPLG SLISVESGRR
IAGMIDDAVA RGAHVLAGGR VHDTLMDATV VDHVLPGMRL YREESFGPVV SIIRVTDADE
AVTAANDCEY GLSGAVFSRD LHRALDVARR VETGILHINS ATVADDPLMP FGGVKASGYG
RFGGVAALDE FTELRWVSLA SGPADYPI
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