| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5038 |
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| Symbol | |
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| ID | 7381199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 30378 |
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| End bp | 31391 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648713 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002546950 |
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| Protein GI | 222106159 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGATT TCCGCAAACC GCCAACCATG GCCGATATTG CCCGCGTCAC GGGTGTGTCG
CCGATGACGG TGTCGCGGGC CTTCAAGACC GATAGTCTGA TCAGCAAGGA AACCCGCGAT
GCCATTCTGC AAGCGGCAGA AGATCTTGGC TATGTATTCG ATTCCACTGC CTCCAATCTG
AGATCGCAGC GCTCCGATTT TGTTGCGGTC ACTATTCCAT CGATCAATAA TGCCAATTTC
GCCGATACGG TCGGTGGTCT CTCGGAAACG CTTGCCACCC GGAAGATGCA AATCCTGCTT
GGTTACACCA ATTACGATAT GCAAGAGGAA GAACGGCTGA TCGAGCAATT GTTGCGTCGC
AAGCCGCAGG CCATCGTCGT GACCGGCGGC AAGCATACGC CCCGCGCCCG CAAATTGCTG
GCCAATGCCC ATATTCCGGT GATCGAGACC TGGGATGTGC CGTCCGAGCC GATTGGCCAC
TATGTCGGCT TTTCCAATGC CGGTGCAGTT TGCGCCATGG TTGATCATTT CGTTGCTGTC
GGTTATCGGC GACTGGCGTT CATTGGCGGG GATGTCGGTC GAGACACACG CGGTAGCGAT
CGCCGCAACG GGTTTATTGC CGCAATGACC CGACACGGGC TGGATGCATC CCGGTTGATC
GCCGCCGGTC CGCCACCGAT CTCGATGCGC GAAGGCGCGA ATGCGATGAC GCGGCTGCTG
GAAACCCTGC CCGATACCGA AGCGGTGATT TGCGTATCTG ACCTGTCGGC GTTCGGCGCT
TTGACGGAAT GTCAGCGGCG CGGCATCGCC GTGCCAGAGG GGATCGCCAT TGCCGGGTTC
GGCAATTATG AAATCGGCGC AATTTCCGTG CCGACGATTA CCACCATCAA TGCCTTTTCC
CGCGACATCG GCGAAAAAGC AGCGCGGCTG ATCCTGGATC TGCTGGACGG GCGGCCATTG
GCCGGAAACA TCACCATCAC GCCTGAACTG ATCCTACGTG ACAGCAGTCT ATAA
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| Protein sequence | MTDFRKPPTM ADIARVTGVS PMTVSRAFKT DSLISKETRD AILQAAEDLG YVFDSTASNL
RSQRSDFVAV TIPSINNANF ADTVGGLSET LATRKMQILL GYTNYDMQEE ERLIEQLLRR
KPQAIVVTGG KHTPRARKLL ANAHIPVIET WDVPSEPIGH YVGFSNAGAV CAMVDHFVAV
GYRRLAFIGG DVGRDTRGSD RRNGFIAAMT RHGLDASRLI AAGPPPISMR EGANAMTRLL
ETLPDTEAVI CVSDLSAFGA LTECQRRGIA VPEGIAIAGF GNYEIGAISV PTITTINAFS
RDIGEKAARL ILDLLDGRPL AGNITITPEL ILRDSSL
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