| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5030 |
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| Symbol | |
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| ID | 7381193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 25671 |
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| End bp | 26702 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648707 |
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| Product | zinc-binding dehydrogenase |
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| Protein accession | YP_002546944 |
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| Protein GI | 222106153 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.959168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCA TTGTTGCCCA TGCGGCAAAA GACGTTCGCA TCGAAGAGGT CGACGAGGTC
GAGCCCGGTC ACGGCGAGGT AAAACTGCGG CTTGCCACCG GCGGCATCTG CGGCAGTGAC
CTTCATTATT ACAATCACGG CGGATTTGGT GCGGTCAGAC TGAAACAACC GATGATCCTT
GGCCATGAAG TCTCGGCCTA TGTCGAGACA TTGGGGGCAG GGGTCACAGG ACTGGACATT
GGCCAACTCG TCGCCGTCTC ACCGTCACGC CCGTGCCACA AATGCGCATA TTGTCAGGAA
GGCCTGCACA ATCAATGCAT TAATATGCGG TTTTACGGCA GCGCCATGCC CTTTCCGCAT
ATCCAGGGTG CGTTCCGGCA AAGCCTTGTC GCTGACGCCA GCCAATGCGT GGTAGCGGAT
GGACTGACAG CAGGGGAGGC GGCGATGGCC GAACCGCTGG CCGTGACGTT GCATGCGACA
CGGCGGGCCG GTGAAATGCT CGGCAAGCGG GTTCTGGTCA CCGGTTGCGG CCCGATTGGC
GTTTTGTCGA TCATTGCCGC TCGCGGAGCC GGAGCGAAAG AAATCGTTGC AACCGATCTC
TCGGATTTTA CCCTGGCACT GGCCAAGGCA GCCGGTGCTG ACCGGGTGAT CAACACCGCA
GCCCAGCCGG ACGGCCTTGC AGAATACGCT GTGGGGAAAG GCACATTCGA TGTGCTTTAC
GAATGCACCG GCGTTGCCTC GGCGCTAGCA GGCGGAATTT CCGCCATGCG CCCACGCGGC
GTCATCATGC AGCTTGGTCT TGGCGGCGAT ATGACCTTGC CAATGATGGC CATTACCGCA
AAGGAACTAG ACCTGCGCGG CTCCTTCCGT TTCCACAGTG AATTTGCGGT CGGGGTGGAG
CTGATGCGCA AAGGGCTGAT CGACGTTAAA CCGCTGATTA CCCACACCGT GCCTCTGGAA
GACGCGCTTT CAGCCTTCAC CATCGCATCC GACCGGAGCA AGGCGATGAA AGCTCAGATT
GCCTTTTCCT GA
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| Protein sequence | MKAIVAHAAK DVRIEEVDEV EPGHGEVKLR LATGGICGSD LHYYNHGGFG AVRLKQPMIL
GHEVSAYVET LGAGVTGLDI GQLVAVSPSR PCHKCAYCQE GLHNQCINMR FYGSAMPFPH
IQGAFRQSLV ADASQCVVAD GLTAGEAAMA EPLAVTLHAT RRAGEMLGKR VLVTGCGPIG
VLSIIAARGA GAKEIVATDL SDFTLALAKA AGADRVINTA AQPDGLAEYA VGKGTFDVLY
ECTGVASALA GGISAMRPRG VIMQLGLGGD MTLPMMAITA KELDLRGSFR FHSEFAVGVE
LMRKGLIDVK PLITHTVPLE DALSAFTIAS DRSKAMKAQI AFS
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