| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4313 |
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| Symbol | |
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| ID | 7386554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3626934 |
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| End bp | 3628862 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652970 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002551141 |
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| Protein GI | 222150184 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.7654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCA CAATAAAACT CAAACTTGCA TTGGCTTTCG GGCTTATGAT CGCCATGCTG
ATTGCGGTCG CATTGTATGG CATCTCCAGC ATCGGGACGA TCAACCAGGC TGCGTCTGAT
ATTATCGCCG GACCGGCTAA ACGGCTCGAA TACGCATTGT CGGCTTCCAG CAAAATGTCA
GAAGCCATTC GCGCCCAGAA AAATGCCCTG CTTTCCAAGG ATGATGCGGA AGCCAAGGCA
TATTATCTGG CATCCGACAC CAACATCAAA GATATGATCG GCTTGGGACA GGCAGGTCTT
GCGATTGCAA GTCAGCAGGG CAAACCCTAC TGGGAGTCCG TGATCAAGAA TGCTCTGGAT
TTCAGAGAAT CTGCGGCTCG TCTTCCAGAT ATCCAGGCGG CCGGCAAAGT GAATGATGCC
ATAGCGCTTT CGAATGGCGA CCTGCGAGCT TTGGCGACCA ATATGGCTGA AGCCATTACA
AAACTGGTCG AAATTCAGAA GCAGGGCATG GCCAAAGCGG ATGAGGATAC AGATACTCTC
TATGCCGAGA CGAGGACCAT GGTTCTCGTT GTCGCGGGGA TTGCTACGCT TCTCGCAATT
GCGGCTGCCT TGTGGATTGC TTTTGGCATC AGCGCCGGGC TTCGCAAGAT CGAAACTGTT
GCCAATGCCG TTTCCATCGG CGATCTGGAC CAGACCGTTG AAGTGAAAAC CAATGACGAG
ATCAAGGATC TTGTCACGAC GATTAACGGG ATGACGGAAA ATCTGCGAGC AACTGCCGCT
TTGGCAAACC GCATCTCCGA AGGTGATTTG TCTCAGGATA TCACGCCCCT CTCGAGCAAG
GATTCGTTGG GCATCGCTAT GCGATCCATG ACCGTCAATC TGCGTGAAAC GGCAGCTACT
GCCGATAAGA TTGCCAATGG TGATTTGACG GTGACGACGA CGCCGCGCTC CAATGTCGAC
ACGCTGGGCC TTGCCTTGCA GAGCATGGTG GAGCGTCTTC GGGGTGTTGT TGCCGATGCC
TTGTCGGCGT CTGACAACGT TTCTTCCGGC AGCCAGGAAC TGTCCTCAAG CTCTGAACAG
CTGTCGCAGG GCGCGACGGA ACAGGCGTCG TCTGCCGAAG AAGCTTCCGC CTCGATGGAA
GAGATGGCAG CCAATATCAA GCAGAATGCC GACAATGCCG CCCAGACCGA AAAGATCGCC
CGCCAGTCCT CCAAGGATGC GGAAGCCTCT GGCGAAGCGG TCAACCGTGC TGTCGGTGCG
ATGCGCACGA TTGCCGAGAA GATCTCGATC GTCCAGGAAA TCGCTCGCCA GACCGATCTT
CTGGCCTTGA ATGCGGCGGT TGAAGCCGCC CGTGCGGGTG AGCATGGCAA GGGCTTTGCG
GTGGTTGCCT CTGAAGTGCG CAAGCTTGCC GAGCGCAGCC AGGCAGCAGC AGCTGAAATC
AGCACGCTGT CGGGCCAGAC GGTACAGGTG GCAACGGAAG CCGGTGAAAT GCTCGGCCGG
TTGGTTCCTG ACATCAGAAA GACGGCGGAC CTGATTTCCG AGATCTCGGC AGCGTGCCGT
GAGCAGGATA TCGGTGCGAG CCAGATCAAC GAGGCGATCC AGCAGCTCGA CAAGGTGACG
CAGCAGAATG CGGGTGCCTC GGAAGAAATG TCTGCAACCT CTGAAGAACT CGCCGCTCAG
GCCGAGGAGC TCCAGGCTTC CATCGCCTTC TTCAAGGTGG ATGGACTGAA GGCGCAGAAG
AAGGCGGCCC AAAACTATAC GTCGCAGCCT GCAAGACCGG CCAAAATCAC GACAGCGGCG
GCTGTTGTGC GCAGGCCTTC GGCAGCACAG ACCGTTTCCG CTCAGCAGGC GAGAGCCAAG
GGTTTTGCCC TCGACCTCTC CATGGGCGGA CCGGATGACG AAGATCACGA TTTCCGCCAG
CACGCGTGA
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| Protein sequence | MRFTIKLKLA LAFGLMIAML IAVALYGISS IGTINQAASD IIAGPAKRLE YALSASSKMS
EAIRAQKNAL LSKDDAEAKA YYLASDTNIK DMIGLGQAGL AIASQQGKPY WESVIKNALD
FRESAARLPD IQAAGKVNDA IALSNGDLRA LATNMAEAIT KLVEIQKQGM AKADEDTDTL
YAETRTMVLV VAGIATLLAI AAALWIAFGI SAGLRKIETV ANAVSIGDLD QTVEVKTNDE
IKDLVTTING MTENLRATAA LANRISEGDL SQDITPLSSK DSLGIAMRSM TVNLRETAAT
ADKIANGDLT VTTTPRSNVD TLGLALQSMV ERLRGVVADA LSASDNVSSG SQELSSSSEQ
LSQGATEQAS SAEEASASME EMAANIKQNA DNAAQTEKIA RQSSKDAEAS GEAVNRAVGA
MRTIAEKISI VQEIARQTDL LALNAAVEAA RAGEHGKGFA VVASEVRKLA ERSQAAAAEI
STLSGQTVQV ATEAGEMLGR LVPDIRKTAD LISEISAACR EQDIGASQIN EAIQQLDKVT
QQNAGASEEM SATSEELAAQ AEELQASIAF FKVDGLKAQK KAAQNYTSQP ARPAKITTAA
AVVRRPSAAQ TVSAQQARAK GFALDLSMGG PDDEDHDFRQ HA
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