| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4227 |
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| Symbol | mtrA |
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| ID | 7386983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3555724 |
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| End bp | 3556407 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652901 |
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| Product | two component response regulator |
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| Protein accession | YP_002551074 |
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| Protein GI | 222150117 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0109817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGCTC GGACGATCCT TCTGGTCGAT GACGACGATG ACCTGCGCGA AACGCTGGTG
GAACAACTTT CCCTTTACGA GGAGTTTTCG ATCCAGCAGG AATCCAACGC CACCAAGGGC
GTGCAGGCGG CCCGCAATGG CCAGGTGGAC CTGATGATCA TGGATGTGGG CCTGCCGGAC
ATGGATGGCC GCGAAGCCGT GAAACTGCTG CGCAAGGGCG GCTTCAAGGC CCCCGTCATC
ATGCTGACCG GTCACGATAC CGATTCCGAC ACCATTCTGG GGCTTGAGGC CGGTGCGAAC
GACTATGTTA CCAAGCCATT CCGCTTTGCC GTTCTGCTCG CCCGCATCCG TGCGCAGTTG
CGCCAGCACG AGCAGAGCGA AGACGCCACG TTTACCGTCG GTCCCTATCT GTTCAAGCCA
AGCCAGAAGC TGCTGACCAC CGAAGATGGC AAGAAAATCC GGCTGACGGA AAAGGAAGCG
GCCATCATCC GCTACCTCTA CCGCGCCGGG CAAAAAGTCG TCACCCGCGA CGTGCTGCTG
GAAGAAGTCT GGGGATACAA CTCCGGCGTC ACCACCCATA CGCTGGAAAC CCATGTCTAT
CGCCTGCGCC AGAAGATAGA ACGGGACCCG TCCAATGCCG AAATTCTGGT GACGGAAAAC
GGCGGCTACA AGATTATTCC CTAA
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| Protein sequence | MAARTILLVD DDDDLRETLV EQLSLYEEFS IQQESNATKG VQAARNGQVD LMIMDVGLPD
MDGREAVKLL RKGGFKAPVI MLTGHDTDSD TILGLEAGAN DYVTKPFRFA VLLARIRAQL
RQHEQSEDAT FTVGPYLFKP SQKLLTTEDG KKIRLTEKEA AIIRYLYRAG QKVVTRDVLL
EEVWGYNSGV TTHTLETHVY RLRQKIERDP SNAEILVTEN GGYKIIP
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