| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4189 |
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| Symbol | ccmB |
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| ID | 7386955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3529505 |
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| End bp | 3530164 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652873 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_002551046 |
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| Protein GI | 222150089 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGCTC TTTTCCTGCG CGACTTGAAA CTGTCGGTCA GGGCGGGCGG CGGCGCGCTG
ATCGGTGTGC TGTTCTTCCT GACTGTGGTT GCCGTCATTC CCTTTGGCGT CGGACCGGAT
ATGAATCTGC TGGCCCGCAT CGGCCCGGCC ATTGTCTGGA TTGGCGCGCT GCTGTCGGCG
TTGCTTGGCC TCGACCGGCT ATTTCAGGCC GACCGTGATG ACGGTTCGCT GGATCTGCTC
CTGATGCAGG AGACACCGCT GGTGCTGACC GTTTTCGTAA AGTGTCTCGC CCATTGGACG
GCGACCAGCC TGCCGCTGGT GATCGCTTCG CCGCTGCTGG GCCTGTTCAT GAATATGAGC
GAAATAGCCA TCGGGGCGGT GATGTTGACG CTGCTGGTTG GCTCTCCCGC ACTCACCTTC
ATCGGCGCTG CCGGGGCAGC CGTCGCCGTG GCCCTACCGC GCGGTGGATT GCTGGTGTCG
ATCCTGGTTC TGCCGCTGGC CATTCCGGTG CTGATTTTCG GTGTCAGCGC CTCCTATGCG
GCTGTGGAAG ACCCGGCCCC TTTTCTGCCG CCCTTTCTGT TTTTATCGGC ACTTACTTTA
TTCTTCGCTG TCATCGGGCC ATCGGCAGCC GCATTGGCGC TTAGAAACAC AGCGGATTGA
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| Protein sequence | MIALFLRDLK LSVRAGGGAL IGVLFFLTVV AVIPFGVGPD MNLLARIGPA IVWIGALLSA
LLGLDRLFQA DRDDGSLDLL LMQETPLVLT VFVKCLAHWT ATSLPLVIAS PLLGLFMNMS
EIAIGAVMLT LLVGSPALTF IGAAGAAVAV ALPRGGLLVS ILVLPLAIPV LIFGVSASYA
AVEDPAPFLP PFLFLSALTL FFAVIGPSAA ALALRNTAD
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