Gene Avi_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4161 
SymbolargG 
ID7386936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3509880 
End bp3511109 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content58% 
IMG OID643652854 
Productargininosuccinate synthase 
Protein accessionYP_002551027 
Protein GI222150070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0397228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACTTC CGAAAGACGT CAAAAAGGTC GTTCTCGCCT ATTCCGGCGG TCTCGATACC 
TCGATCATCC TGAAATGGCT CCAGACCGAA CTCGGTGCTG AAGTCGTGAC ATTCACCGCC
GATCTCGGCC AGGGCGAAGA ACTGGAACCG GCCCGCAAGA AAGCGGAAAT GCTGGGCATC
AAGGAAATCT TCATCGAGGA TGTCCGCGAA GAGTTCGTCC GCGATTTCGT CTTCCCGATG
TTCCGCGCCA ATGCCGTCTA TGAAGGCGTC TACCTGCTCG GCACTTCGAT TGCCCGTCCG
CTGATTTCCA AGCATCTGAT CGAGATTGCC AAGAAGACCG GCGCCGACGC CATTGCCCAT
GGCGCGACCG GCAAGGGCAA TGACCAGGTT CGCTTCGAGC TTTCGGCCTA CGCGCTAAAC
CCTGATATCA AGATCATCGC CCCTTGGCGC GATTGGGCTT TCAAGAGCCG CACCGATTTG
CTGGCCTTTG CTGAAGCAAA CCAGATCCCG GTCGCCAAGG ACAAGAAGGG CGAAGCGCCG
TTCTCCGTCG ATGCCAACCT GTTGCATTCC TCTTCCGAGG GCAAGGTTCT GGAAGACCCG
TCCCAGGAAG CGCCGGAATA TGTGCATATG CGCACGATTT CGCCGGAAGC TGCTCCCGAC
AAGGCGACCA CTATCAAGGT TGGCTTTGAA AAGGGCGATG CCGTGTCGAT CAACGGCGTG
CGGATGAGCC CGGCGACGCT GCTGGCCGAA CTCAACACCT ATGGCCGTGA CAACGGCATT
GGCCGTCTGG ACCTGGTTGA AAACCGCTTC GTCGGCATGA AGAGCCGTGG TGTTTACGAG
ACCCCTGGCG GCACCATCCT GTTGACGGCC CACCGCGCCA TCGAATCGAT CACGCTGGAT
CGTGGCGCTG CTCATCTCAA GGATGAGCTG ATGCCGCGCT ATGCTGAGCT GATCTATTAC
GGTTTCTGGT TCTCGCCGGA GCGGGAAATG TTGCAGGCGA TGATCGACAA GAGCCAGGAA
CATGTCGAAG GCGAAGTGAC GCTGAAGCTC TACAAGGGCA ATGTCATGGT CATCGGTCGC
GAATCGCCAA AGTCGCTCTA TTCCGACCAG CTCGTCACCT TCGAAGACGA CCAGGGCGCC
TATGATCAGA AGGATGCAGC GGGCTTCATT AAGCTCAATG CGCTCCGTCT GCGCACGCTG
GCCAAGCGCA ATCTCGGCAA GTCATCATAG
 
Protein sequence
MVLPKDVKKV VLAYSGGLDT SIILKWLQTE LGAEVVTFTA DLGQGEELEP ARKKAEMLGI 
KEIFIEDVRE EFVRDFVFPM FRANAVYEGV YLLGTSIARP LISKHLIEIA KKTGADAIAH
GATGKGNDQV RFELSAYALN PDIKIIAPWR DWAFKSRTDL LAFAEANQIP VAKDKKGEAP
FSVDANLLHS SSEGKVLEDP SQEAPEYVHM RTISPEAAPD KATTIKVGFE KGDAVSINGV
RMSPATLLAE LNTYGRDNGI GRLDLVENRF VGMKSRGVYE TPGGTILLTA HRAIESITLD
RGAAHLKDEL MPRYAELIYY GFWFSPEREM LQAMIDKSQE HVEGEVTLKL YKGNVMVIGR
ESPKSLYSDQ LVTFEDDQGA YDQKDAAGFI KLNALRLRTL AKRNLGKSS