| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4124 |
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| Symbol | sucD |
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| ID | 7388915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3479640 |
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| End bp | 3480542 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652823 |
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| Product | succinyl-CoA synthetase subunit alpha |
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| Protein accession | YP_002550996 |
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| Protein GI | 222150039 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATTC TGATCAATAA AGACACCAAG GTTCTCGTAC AGGGCCTGAC CGGCAAGACC
GGCACTTTCC ATACCGAGCA GGCGCTTGCC TATTACGGCA CCAAGATGGT CGGCGGTATT
CACCCGGCCA AGGGCGGTAG CAACTGGACC GGCTCCAAGG GTGAAACCCT GCCGATCTTT
GCGTCTGTTG CCGAAGGCAA GGACGTCACT GGCGCCAATG CATCGGTGAT CTACGTTCCG
CCAGCCGGTG CTGCTGCGGC GATCATCGAA GCCATCGAAG CTGAAATTCC GCTGATCGTC
TGCATCACGG AAGGCATTCC GGTCGCCGAC ATGGTCAAGG TCAAGGCGCG CCTCGACAAG
TCCAAGTCGC GCCTGATTGG CCCGAACTGC CCAGGCGTGA TGACGCCGGA AGAATGCAAG
ATCGGCATTA TGCCGGGCTC GATTTTCCGC AAGGGGTCTG TTGGCGTGTT GTCGCGTTCC
GGCACTTTGA CGTACGAAGC AGTGTTCCAG ACCTCGAATG AAGGCCTCGG CCAGACCTCG
GCTGTGGGCA TCGGCGGCGA CCCGGTCAAG GGCACCGAGT TCATCGACAT CCTGGAAATG
TACCTCGCTG ACGAAGCCAC CAAGTCGATC ATCATGATCG GTGAAATCGG TGGTTCGGCT
GAAGAAGAAG CCGCACAGTT CCTCAAGGAC GAAGCCAAGA AGGGCCGCAA GAAGCCGATG
GTTGGCTTCA TCGCCGGTCG TACGGCTCCT CCCGGTCGCA CCATGGGTCA CGCAGGCGCT
GTGATCTCCG GCGGCAAGGG CGGCGCGGAA GACAAGATCG AAGCCATGGA ATCGGCGGGC
ATACGGGTTT CGCCCTCGCC AGCCCGCCTT GGCAAGACGC TGGTTGAAGT TCTCAAGGGC
TGA
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| Protein sequence | MSILINKDTK VLVQGLTGKT GTFHTEQALA YYGTKMVGGI HPAKGGSNWT GSKGETLPIF
ASVAEGKDVT GANASVIYVP PAGAAAAIIE AIEAEIPLIV CITEGIPVAD MVKVKARLDK
SKSRLIGPNC PGVMTPEECK IGIMPGSIFR KGSVGVLSRS GTLTYEAVFQ TSNEGLGQTS
AVGIGGDPVK GTEFIDILEM YLADEATKSI IMIGEIGGSA EEEAAQFLKD EAKKGRKKPM
VGFIAGRTAP PGRTMGHAGA VISGGKGGAE DKIEAMESAG IRVSPSPARL GKTLVEVLKG
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