12 homologs were found in PanDaTox collection
for query gene Avi_4080 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011989  Avi_4080  hypothetical protein  100 
 
 		 110 aa  217  5e-56  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_0328  chemotaxis protein CheX  63.64 
 
 		 98 aa  123  7e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.822506 
 
 
-
 
NC_011369  Rleg2_0296  chemotaxis protein CheX  62.63 
 
 		 98 aa  122  2e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.18336  normal  0.441954 
 
 
-
 
NC_009636  Smed_0233  putative chemotaxis protein CheX  57.89 
 
 		 97 aa  115  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.262963  normal  0.176079 
 
 
-
 
NC_009484  Acry_2706  hypothetical protein  41.57 
 
 		 100 aa  72.8  0.000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.851372  n/a   
 
 
-
 
NC_010338  Caul_0277  CheX protein  44.3 
 
 		 95 aa  71.2  0.000000000004  Caulobacter sp. K31  Bacteria  normal  0.255242  normal  0.954082 
 
 
-
 
NC_010581  Bind_3621  hypothetical protein  39.53 
 
 		 116 aa  69.7  0.00000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.0123877 
 
 
-
 
NC_009485  BBta_2141  hypothetical protein  39 
 
 		 106 aa  63.9  0.0000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_1448  hypothetical protein  33.33 
 
 		 111 aa  58.5  0.00000003  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007802  Jann_2843  CheX protein  37.66 
 
 		 101 aa  50.4  0.000008  Jannaschia sp. CCS1  Bacteria  normal  0.908112  normal  0.278338 
 
 
-
 
NC_009428  Rsph17025_1792  hypothetical protein  32.53 
 
 		 99 aa  43.9  0.0008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008043  TM1040_3208  hypothetical protein  30 
 
 		 100 aa  41.2  0.005  Ruegeria sp. TM1040  Bacteria  normal  0.0772481  normal  1 
 
 
-
 
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