Gene Avi_4040 details

Gene Information

• Locus tag: Avi_4040
• ID: 7388851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 3401622
• End bp: 3402413
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643652758
• Product: hypothetical protein
• Protein accession: YP_002550932
• Protein GI: 222149975

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTTA AGCTTGTTCG TAAACTGACT TTTCTGCTGG TCGCGCTTGG CGCTCCGCTG 
GCCTCTGGGA GCGGTTCTGC CTTTGCAGGA GAGACCTATC GCAATGAATA CCGCGTCACC 
CTGCTTGGTC TGCCCGTCGC CCGTGCGACC TTCGTTACCG AGGTCACACG TCCCGGCTAC 
ACCATTACCG GCACGATCTC GTCGGCGGGC ATTGCCAATG TCTTCACTAG TCTCGATGCA 
AAGACCAAGG TGACGGGGCA GGTGGCTGAT GACAAGCATT TGCAGGCCAG CAATTACAAT 
CTGGTCTATA CGCGGGGCAA AAGGACGCGG GTCTATGACG TGCGTTATGC GGGCGGCAAT 
GTCGTCTCCA CGACAATCAC CCCTCAACCG AACCGTAACA AGGATCGCTG GATACCGGTG 
AGTGCCGGGG ATCTACGCTC AGTGCTCGAT CCGGTCGGTG GGCTGACCTT GCCAGATGAT 
GGCAAGATCT GCTCCCGGAC CCTGCCGATT TTCGATGGTG AAAGCCGGTT GGACCTGGTG 
ATGTCGCCAA AGGGCAAGAA CAAGTTTACC GCGGGCAATG TTTCCGGCGA GGCGATCGTC 
TGCTCCGTTC GCTATGTGCC GAAATCCGGC TTTAACAAGG GCCGCAGCGA TATCGAATAT 
CTGCGCAGCG CCAACGATAT GGAAATCTGG TTTGCCAAGA CCGGAACCAT GACCTTATAT 
GCCCCTGTTT ATGCGCGGGT GCCAACGCGG GTGGGAACGC TGTCGATCAC AGCGACCCGG 
TTTGGAGCCT GA 

 

Protein sequence

MRFKLVRKLT FLLVALGAPL ASGSGSAFAG ETYRNEYRVT LLGLPVARAT FVTEVTRPGY 
TITGTISSAG IANVFTSLDA KTKVTGQVAD DKHLQASNYN LVYTRGKRTR VYDVRYAGGN 
VVSTTITPQP NRNKDRWIPV SAGDLRSVLD PVGGLTLPDD GKICSRTLPI FDGESRLDLV 
MSPKGKNKFT AGNVSGEAIV CSVRYVPKSG FNKGRSDIEY LRSANDMEIW FAKTGTMTLY 
APVYARVPTR VGTLSITATR FGA