| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3943 |
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| Symbol | |
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| ID | 7387295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3306766 |
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| End bp | 3309486 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643652679 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002550860 |
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| Protein GI | 222149903 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.292729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA GCCTACTCCT TTATATATGG CGGCATACGC GCAAGCAGCA GATCTGGGTT
CTGACGATTG TTATCCTGTC GATGGTGCCG TATTTTCTGG CCTTCGACCT GCCCAAGCGC
ATCATCAATG GGCCGATCCA GGGAAGCGGG TTCGAAGCGC CGGATTCCCG ACAACCGCTG
TTTGCCTTCG ACTGGACCGT GCCTTTGACC GATTGGTCAT TGCATTCGGG CGGGATACCG
CTTGATCGCA TGTCGAGCCT GATGGCGTTA AGTGGCGTCT TCCTGCTGCT GGTGATCATC
AACGGGTTGT TTAAATTCTA CATCAATACC TATAAGGGTA GGCTTGGAGA ACGCCTTTTG
CGGCGGATCC GCTATGAGCT TGTGGACCGG GTGCTGCGGT TCCCGCCAAG CTATGTCAAG
CAGATCCATT CCTCTGAAGT CTCGACCATG GTCCGCGACG AGGTCGAGCC GTTTGGCGGC
TTTACGGGGG ATGCCTTTGT GCAGCCCACT ATGCTGGGCG GTCAGGCCTT GGCGGCGCTG
TTCTTCATTT TCCTGCAAAG TTTCTGGCTT GGCACGATTG CAGGCGCAAT GGTGGCGCTT
CAGGTCGGCA TCATTCCCAA AATGCGCCGT CGCTTGCTTA TTCTTGGTCG TCAGCGGCAG
CTTCAGGCCC GGCAATTGGC CGGAAAAGTC GGAGAAATCG TCGATGGCGT CGGCACGATC
CATGCATATG ATACGTCGAA TTATGAACGC GCCGATATTT CGAAGCGGCT CGGCGATATC
TTCAAGATTC GCTACGATCT CTATCGCTGG AAGTTTTTCG TCAAATTTTT CAATAATTTC
CTGTCGCAGC TGACGCCCTT CCTGTTCTAT TCCATCGGCG GCTATTTCGC GCTGAAGGGC
AGTCTGGACG TGGGCCAGCT GGTGGCTGTC ATCAATGCCT ACAAGGATCT TCCCGGTCCG
TTGAAAGAGC TGATCGACTG GGACCAGTCG CGCCAGGACG TTCAGGTAAA ATATGAACAG
GTGCTCGAAC AATTCGAGCC GCCGCAGATG ATTGAGCCAG CACTACAGGC GTTGGCGCCT
GTGGGAATGG CTACCCGTGC TGGCCAACTC GCCTTGCAGA ATGTGACCTT GCAAGATAGC
GGCGGTGCCA AGGTGGTGGA AAATCTCAGC CTGAAAATTG GACAGGGAGA GACGATTGCC
GCTATCGACA ATCGCGGCGT TGGTGCGGAA GTGATGGCTG AGGCCATTGG CCGGTTGAAC
TGGCCGGTGG CGGGAAAGAT CGTGCTTGGT GATGCTGACC TGCTGGAATT GCCGGAATCG
GTGACGGGCC GGGCTATTTC CTATGTATCT GCCGACGGTT ATTTCTTTCA TGGCAGCCTC
AAGGAAAACC TGATTTACGG GCTGAAACAT GCACCGACCA ATTCGGTGAA CTATACCGGG
CGCGAGGCGA TCAAACGCCG TTGGGAGATC AAGGAAGCGC AATTATCTGA GAACTCCGAT
CTCGATCCCA ATGCCGACTG GATTGACCGG CGGGCGACGT CCGTGTTGCA CGGTGAAGCC
AGCGACCTGA AAAAATCGAT TTTGACGGCG CTGGATACCG TGAAACTGAC CAGCGACGTG
ATGGAACTGG CGCTGCATTC CATCGTCGAT CCGCTTGAAT ATCCGGACCT GACAGAAAAA
GTGGTGGAGT TGCGTCTGGC GCTGCGTGAT GAATTGCAGC GGCAGGGTCT TGCCAATCTC
GTGGTTCACT TTGACCCCAA TGCTTATAAT GCCGAGGCGA CATTGGGAGA AAACCTGTTG
TTCGGGACGC TGCGTCCGAT CGTCAATGGA CCTGTCTATG CCCATCAAAG CGATTATTTT
TATGATGTGC TGGAGCGCGC CGGTCTGCTC AGCCTATTTT ACGAGATGGG TTTCCTGATT
GCGGAAAACC TTGTGGAAAT CTTCGGCGGT CTGCCAGCCG ATCACCCGTT CTTCCAGCAG
CTCGATGTCC TGACCGCTGA TGACGTGGTG TTTTACCAAC AGATCCTGCA ACGCCTTCAA
GGCCGGACCA AGCCGGTGCC GAACGAGGAA GAGCAACGGG CAATGATCCG GCTCAGCTTC
AATTATGTCG AGCCGCGCTA TCGTATGGGT GTGCTGACGG CTGAAGTGAT GGACAAGATT
GTCGGCGCCC GCGACCTGTT TCACGACAAC CTGTCACCGG ACCTGCGCCA TAGTATCGAA
CGCTACGATC CGCATCGCTA CATGGCGGCG GCGACGCTGC GCGAGAACGT GATCTTCGGC
AAACTCGTCA ATCGCAATCC CGAAGCCCTG CCGAAATTCC GCGAGCTGGC GGCAAAACTA
AGCTCGAAGA AAGGCCTGAC AGAGCGATTC CTGGCCCTGG GCCTGGAGTT CGACATCGGC
AGCGGTGGCC GCAGGCTGAC CATCGTTCAG CGCCACAAGC TCAACCTTGC CCGCGCGCTG
GTGCGGCGGT GCGACTATTA TATCTTCAAC AAAGCCCTGC CGGGCCTCGA CGCGCGTGTT
CAGGAGGATA TCGTTAAGGA TGTGCTTGCA TTTCTGCGCG AGCAGGACAA TGATCCCTCT
ATCCTTTGGG TTTTGTCGAA CACATCATTG TCAAAAAACT TTGATCGTGT TCTGATACTC
GACAGCGGTT CATTGGTCGC GGACGGGACG TTCGAGGCCT TGGGCAATGA AAATGATATT
TTCAAGGCAT TGGTGGCATG A
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| Protein sequence | MEKSLLLYIW RHTRKQQIWV LTIVILSMVP YFLAFDLPKR IINGPIQGSG FEAPDSRQPL
FAFDWTVPLT DWSLHSGGIP LDRMSSLMAL SGVFLLLVII NGLFKFYINT YKGRLGERLL
RRIRYELVDR VLRFPPSYVK QIHSSEVSTM VRDEVEPFGG FTGDAFVQPT MLGGQALAAL
FFIFLQSFWL GTIAGAMVAL QVGIIPKMRR RLLILGRQRQ LQARQLAGKV GEIVDGVGTI
HAYDTSNYER ADISKRLGDI FKIRYDLYRW KFFVKFFNNF LSQLTPFLFY SIGGYFALKG
SLDVGQLVAV INAYKDLPGP LKELIDWDQS RQDVQVKYEQ VLEQFEPPQM IEPALQALAP
VGMATRAGQL ALQNVTLQDS GGAKVVENLS LKIGQGETIA AIDNRGVGAE VMAEAIGRLN
WPVAGKIVLG DADLLELPES VTGRAISYVS ADGYFFHGSL KENLIYGLKH APTNSVNYTG
REAIKRRWEI KEAQLSENSD LDPNADWIDR RATSVLHGEA SDLKKSILTA LDTVKLTSDV
MELALHSIVD PLEYPDLTEK VVELRLALRD ELQRQGLANL VVHFDPNAYN AEATLGENLL
FGTLRPIVNG PVYAHQSDYF YDVLERAGLL SLFYEMGFLI AENLVEIFGG LPADHPFFQQ
LDVLTADDVV FYQQILQRLQ GRTKPVPNEE EQRAMIRLSF NYVEPRYRMG VLTAEVMDKI
VGARDLFHDN LSPDLRHSIE RYDPHRYMAA ATLRENVIFG KLVNRNPEAL PKFRELAAKL
SSKKGLTERF LALGLEFDIG SGGRRLTIVQ RHKLNLARAL VRRCDYYIFN KALPGLDARV
QEDIVKDVLA FLREQDNDPS ILWVLSNTSL SKNFDRVLIL DSGSLVADGT FEALGNENDI
FKALVA
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