Gene Avi_3934 details

Gene Information

• Locus tag: Avi_3934
• ID: 7387290
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 3302275
• End bp: 3303018
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643652674
• Product: hypothetical protein
• Protein accession: YP_002550855
• Protein GI: 222149898

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAA TTCTCTTGAG GCAGTGCCTC GATGATCTCG CCGCCCAAGG AAAGACGGTC 
AAATTCTGGC TGCGCGATGA CGATGCGGTT GAGCCGAGTG ATCCCTTGGA GACCCTGCTG 
GTGCTTGCCC GCCGCTTCCA GATACCGCTA ACGCTGGCGG TCATTCCCGA GCCGACGGGT 
GTGACGCTGG CCGGATTGCT GCGGGCAGAA TCCCTGGCCA CCATCGCCGT GCATGGCTGG 
AACCACCAGA GCCATGCTGG TCCGGGTGAA AAGAAGCAGG AACTGGGTGG GCATCGCCCG 
GCAGCAATCG TCCTGGAGGA GCTGCACCAG GGATTGGCCA AGCTGCGCGG TCTTTACAGT 
GAACAACTGC TGCCGATGCT GGTGCCGCCG TGGAACCGGA TCGACAAGGC CCTGGTGCCA 
GCGTTGCCCG GTCTCGGCTT TACAACGCTG TCGGTGTTTG GCCGCGAGAA ACGCATAAAT 
ACTCTAACCC TTCTCAACAC CCATGTGGAT GTGATGGATT GGCACGGGAC GCGGGGTGGA 
CGTGATGCCG ATATCCTGTT TGCGGAACTG GCTGCCTATC TGGCCCCAGA ATCTGAGCCT 
TTACAGGCCG TTGGCATCCT GACCCATCAT CTGGTTCATG ACCAAACGGT CTGGGATTTC 
CTGACGCGGC TGTTCGCCCT GACCGCCACC CATCCGGCCT GCCGCTGGGA AAGTGCGCGG 
ACATTGCTTC AGCGGCAAGC ATAA 

 

Protein sequence

MSEILLRQCL DDLAAQGKTV KFWLRDDDAV EPSDPLETLL VLARRFQIPL TLAVIPEPTG 
VTLAGLLRAE SLATIAVHGW NHQSHAGPGE KKQELGGHRP AAIVLEELHQ GLAKLRGLYS 
EQLLPMLVPP WNRIDKALVP ALPGLGFTTL SVFGREKRIN TLTLLNTHVD VMDWHGTRGG 
RDADILFAEL AAYLAPESEP LQAVGILTHH LVHDQTVWDF LTRLFALTAT HPACRWESAR 
TLLQRQA