| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3920 |
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| Symbol | |
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| ID | 7387277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3278068 |
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| End bp | 3279348 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652661 |
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| Product | cynate permease protein |
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| Protein accession | YP_002550842 |
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| Protein GI | 222149885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2807] Cyanate permease |
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| TIGRFAM ID | [TIGR00896] cyanate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.791953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATG CCCATCCCAA GCTTGATCTT GGCGACGAAT TGCTGATTGA TGCGCAGGCC
GAAGACGCCC CTCTCCCGCC GCAGGCATCA GGCCGGTCGC CTCTGTCGCG CATCGTTCTG
GGCATCAGCC TCGTGTTGAT TGCCTTCAAC CTGCGCCCGT TGTTTTCCAG CGCCTCGACA
CTGCTGCCGG AAATACGCGA TCAATTGGGT CTCTCCGTGC TGGGTGCCAG CCTGCTCACC
ACCTTGCCGG TGGTTTGCCT TGGGGTCTTC TCACCCTTGG CGCCCAGACT TGGCGACCGC
TACGGCGCGG AAAAGACCCT GTTGGCCGTC ATGGCGTTTC TGGCCATCGG CACCGCCTTG
CGCGGCTTTT CCAGCCTTCC CACCTTGTTT TTCGGCACAG CGCTTGCCGG TGCCTGCATT
GCGGTCGGAA ATGTGCTGCT CCCGGGATTG GTGAAACGTG ATTTCCCTGA TCGGGCCGCG
TTGATGACCG GCTTTTACAC CATGGCGCTC TGTGGTGGCG CGGCGGCTGC CGCCGGGCTG
ACCCTGCCGA TCGAGGCGGC CAGCGGCGGT TCGCTGGCCA TCGGCCTTGC CGCCTGGGCA
CTTCCGGCTG CCGTGGTGTT CCTGCTGTTT CTGCCGCAGG CCTTTTCCAG TCATGCGGCA
AGGCCGGGTT TCAAAACCGA CGTGAAAGGC CTTTGGCGTG ACCGGCTGGC CTGGAACGTG
ACGCTTTATA CCGGGTTACA ATCGGCGCTG GCCTATTGCG TCTTTGGTTG GCTGGTGCCG
ATCCTGCGCG AACGTGGGCT GGATGGGGTA ACGGCAGGCG CGGTCGTCTC GGTCTCGGTC
ATGGTGCAGG CGGCGGCCTG TATTGTCGCG CCGCAGCTTG CCGTTCGGGG CAGGAACCAA
AGCCTCGTCA ATGCCACTGT AGCCATTCTC GCGGTCATCG CGCTGATCGG TCTGTTGTTT
GCGCCGCTTT CCACCCTGTG GATCTGGGCC GTTCTGCAAG GCATCGGTCA GGGTGGCCTG
ATTGCACTGG CCATGACCGC CATCGTGCTG CGCTCCGGCA GCCCGCAGAT TGCCGCCCAT
CTCTCCGGCA TGGCGCAATG CATTGGCTAT TGTCTGGCCG CCATTGGCCC GCTGCTTGTC
GGGCTGATCC GTGGCTTCAC GGGCAGTTTC GCCTGGGCCG CGCTGCTGTT TGCCGCGCTC
GGCCTTGGCG CGACCTGGAA TGGCTGGCGG GCAGGCCGCG ATCTGCGGGT CGATGTGGTG
ATCGACGAAA AACCTCATTG A
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| Protein sequence | MTNAHPKLDL GDELLIDAQA EDAPLPPQAS GRSPLSRIVL GISLVLIAFN LRPLFSSAST
LLPEIRDQLG LSVLGASLLT TLPVVCLGVF SPLAPRLGDR YGAEKTLLAV MAFLAIGTAL
RGFSSLPTLF FGTALAGACI AVGNVLLPGL VKRDFPDRAA LMTGFYTMAL CGGAAAAAGL
TLPIEAASGG SLAIGLAAWA LPAAVVFLLF LPQAFSSHAA RPGFKTDVKG LWRDRLAWNV
TLYTGLQSAL AYCVFGWLVP ILRERGLDGV TAGAVVSVSV MVQAAACIVA PQLAVRGRNQ
SLVNATVAIL AVIALIGLLF APLSTLWIWA VLQGIGQGGL IALAMTAIVL RSGSPQIAAH
LSGMAQCIGY CLAAIGPLLV GLIRGFTGSF AWAALLFAAL GLGATWNGWR AGRDLRVDVV
IDEKPH
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