| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3909 |
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| Symbol | ilvD |
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| ID | 7388586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3269792 |
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| End bp | 3271501 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652653 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002550834 |
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| Protein GI | 222149877 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.505507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAGGTCGC AGGAATGGTA CGGCGGCAAC TCACGCGATA CGATTTACCA TCGCGGCTGG
ATGAAGAACC AGGGATATCC GCATGACCTG TTCGATGGCC GTCCGGTCAT CGGCGTTCTC
AACACCTGGT CGGACCTCAC CCCCTGCAAC GGCCATCTGC GCGAGCTGGC TGAAAAGGTG
AAGGCCGGTA TCTGGGAAGC CGGTGGTTTT CCGGTCGAAG TGCCGGTGTT CTCGGCGTCT
GAAAACACCT TCCGCCCGAC CGCGATGATG TATCGCAACT TGGCGGCGCT GGCCGTCGAG
GAAGCCATGC GTGGCCAGCC AATTGATGGC GCCGTGCTGT TGGTCGGCTG CGACAAGACG
ACGCCGTCGC TGGTGATGGC CGCTGCCTCT ACCGACATTC CGTCCATCGT CGTTACCGGC
GGGCCGATGC TGAACGGCTA TTTCCGTGGC GAGCGTGTCG GCTCCGGCAC GCATCTGTGG
AAATTCTCCG AGGCCGTCAA GGCAGGCGAG ATGACCCAGG AAGAATTCAT GGAGGCCGAA
GCCTCGATGT CACGCTCCAG CGGCACCTGC AACACCATGG GCACAGCCTC GACCATGGCG
TCGATGGTAG AATCGCTCGG CATGGCCTTG TCCGGCAATG CCGCCATTCC CGCCGTTGAC
AGCCGCCGCC GGGTGATGGC GCAGCTTTCG GGTCGCCGGA TCGTGCAAAT GGTCAAGGAC
GACCTGAAAC CATCCGACAT CATGACCAAG GAAGCCTTTG AAAACGCCAT CCGCATCAAT
GGTGCCATCG GCGGTTCCAC CAATGCGGTC GTGCATCTTC TGGCCATGGC CGGTCGCTGT
GGGATCGATC TGACGCTGGA TGACTGGGAC CGCTGTGGCC GCGATATCCC CACCATCGTC
AACCTGATGC CATCGGGCGA GTATCTGATG GAAGAATTCT TCTATGCCGG TGGTCTGCCC
GTGGTCATCA AGATGCTGGC CGAAGCCGGC AAGCTGCATA AGGACGCGCT GACCGTTTCC
GGCGAAACCC TGTGGGACGA AGTCAAGGAT GTCCGCAACT GGAACGAAGA CGTCATCCGC
CCCTTCGACA AGGCGCTGAC CCAGCAGGGC GGCATCGCCG TGCTGCGTGG AAACCTGGCC
CCGAAGGGCT GCGTGCTGAA GCCATCGGCG GCTTCCGCGC ATCTGATGAA ACATCGCGGT
CGCGCTGTGG TGTTCGAAGA CATCGACGAT TACAAGGCCA AGATCAATGA CGAGGCCCTC
GACATTGACG AAACCTGCGT GATGGTGATG AAGAACTGTG GTCCGCGTGG CTATCCAGGC
ATGGCCGAGG TCGGCAATAT GGGCCTGCCG CCCAAGGTGC TGCGCAAGGG CATTACCGAC
ATGGTGCGCA TTTCCGATGC CCGCATGTCC GGCACCGCAT ACGGTACCGT GCTGCTGCAC
ACCTCGCCGG AAGCCGCCCG TGGCGGACCG CTGGCCATCG TCAAGAATGG CGACTTCATC
GAAATCGATG TCGAGGCACG CCGGGTGCAT CTGGATATTT CCGACGAGGA AATGCAGCGC
CGCCTAGCCG ATTGGCGTCC GAATGTCGAG CCGCCAGCCA GCGGCTATGC CCGCCTGTTC
CACGATCACG TGGAGGGTGC CGATACCGGC GCCGACTTCG ACTTCCTCAA GGGCTGCCGT
GGTGCCGCCG TTGGCAAGGA CGCGCATTGA
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| Protein sequence | MRSQEWYGGN SRDTIYHRGW MKNQGYPHDL FDGRPVIGVL NTWSDLTPCN GHLRELAEKV
KAGIWEAGGF PVEVPVFSAS ENTFRPTAMM YRNLAALAVE EAMRGQPIDG AVLLVGCDKT
TPSLVMAAAS TDIPSIVVTG GPMLNGYFRG ERVGSGTHLW KFSEAVKAGE MTQEEFMEAE
ASMSRSSGTC NTMGTASTMA SMVESLGMAL SGNAAIPAVD SRRRVMAQLS GRRIVQMVKD
DLKPSDIMTK EAFENAIRIN GAIGGSTNAV VHLLAMAGRC GIDLTLDDWD RCGRDIPTIV
NLMPSGEYLM EEFFYAGGLP VVIKMLAEAG KLHKDALTVS GETLWDEVKD VRNWNEDVIR
PFDKALTQQG GIAVLRGNLA PKGCVLKPSA ASAHLMKHRG RAVVFEDIDD YKAKINDEAL
DIDETCVMVM KNCGPRGYPG MAEVGNMGLP PKVLRKGITD MVRISDARMS GTAYGTVLLH
TSPEAARGGP LAIVKNGDFI EIDVEARRVH LDISDEEMQR RLADWRPNVE PPASGYARLF
HDHVEGADTG ADFDFLKGCR GAAVGKDAH
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