| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3885 |
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| Symbol | |
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| ID | 7388565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3244432 |
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| End bp | 3245265 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652632 |
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| Product | ABC transporter |
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| Protein accession | YP_002550813 |
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| Protein GI | 222149856 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCT TGTTGACGGT GGATAATCTC AAGGTCAGTT TTCCGACCCG CACGGGTCTG
GTGGAAGCCG TGCGCGGCGT GTCCTTCACG CTGGGCAAGG AGCGACTCGG TATTGTCGGC
GAATCCGGCT CCGGCAAATC CCAGACCGGA CGGGCGATCA TGGGTCTCAC CCCCGCCCAT
GCACGGATAA CTGCCGATAA ACTGCATTTC GGCGATACGG ATCTGCTGGC GATTTCGACA
GCGAAGCGTC GGACGCTGCG CGGCAAGCGG ATGGCGATGA TCCTTCAGGA CCCCAAGTAT
TCGCTGAACC CTGTCATGCC GATTGGCAAA CAGATCGTCG AGACCTTGTT GACCCATGAA
CGGATGACGG GAAAGCAAGC CCGGCAAAGA GCGTTGGCCA TGCTGGAGGC GGTGCAGATC
CGCGATCCGG AGCGGGTGTT CAAGCTTTAT CCGCATGAAG TTTCCGGCGG CATGGGCCAG
CGGGTGATGA TCGCCATGAT GCTGGTCTGC GGGCCGGAAC TGCTGATTGC CGATGAGCCG
ACCTCAGCCC TGGATGTGAC GGTGCAGCTG GAAGTGCTCG ATATTCTCGA CATGCTGGTG
CGGGAACGCG GCATGGGGCT GATTTTTGTC AGCCATGATT TGCGGCTGGT CTCCTCCTTC
TGCGACCGGG TGCTGGTGAT GTATGCGGGC CGGGTTGTCG AGGAACTGAA TGCGGCCAAC
CTGTCCGAGG CCAAACATCC CTATACCCAG GGCCTGCTGA ATTGCCTGCC GCGCCTGGAA
GGCAACCAGC ATCCGCTGCC AGTGTTGGAG CGTCAGGTGG AGTGGGCGCA ATGA
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| Protein sequence | MSALLTVDNL KVSFPTRTGL VEAVRGVSFT LGKERLGIVG ESGSGKSQTG RAIMGLTPAH
ARITADKLHF GDTDLLAIST AKRRTLRGKR MAMILQDPKY SLNPVMPIGK QIVETLLTHE
RMTGKQARQR ALAMLEAVQI RDPERVFKLY PHEVSGGMGQ RVMIAMMLVC GPELLIADEP
TSALDVTVQL EVLDILDMLV RERGMGLIFV SHDLRLVSSF CDRVLVMYAG RVVEELNAAN
LSEAKHPYTQ GLLNCLPRLE GNQHPLPVLE RQVEWAQ
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