Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3851 |
Symbol | hflK |
ID | 7388538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3199154 |
End bp | 3199747 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652605 |
Product | HFLK protein |
Protein accession | YP_002550786 |
Protein GI | 222149829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.151432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCCAG CAGCCAGTCT CAGCCGCAGG CTTTTGAGCC GAATGACCGG GCGCAGCATG CTGGCGTTTT TCCTGGTATT TTCCGCCATG CCAGCCTTCA GCCAGACGGT GATCCCGGCA CCTTCTGTCA ATGGTCAGGG GAATGGCGCA CCAGGCGGAA TGGATTTCCC CGATCCCTAT CTCTGGCATG TCACCGGACT CAAGCCTGGC CAGCAATTGC CGGTTCTGTC GGGTGCAGGG CCGAATTTCC GCATCATTCA TGCGCTGACC GAAGGTACGC CTGTTGACAT GCAGAACTGC ATGGAAAGCC GGGGCGGCTA TTGGTGCCGG ATCGCCACCG TGGACCGCCC GCGCATCAGC GGCTGGGTGG ATGGCCGCTA TGTCGTCAAA ACCGGTGGCG ACCCGCCAGG GATGATTGGC GGCGTGCCGG TTGATCCGGT GATTGAATTG CCTGTTGGTA AAGGCCAGGG GGGTAAAGGC CAAGGAGGCA AAGGCCAGGG CGGACAAGGT TCCAGCTGGC AGAACAATGG CAGCGGCTAT GCCAATCCGT TCGGCAATAG CCAAAGCGGG GCGGGCGGCA ATAGCGATGA GTGA
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Protein sequence | MPPAASLSRR LLSRMTGRSM LAFFLVFSAM PAFSQTVIPA PSVNGQGNGA PGGMDFPDPY LWHVTGLKPG QQLPVLSGAG PNFRIIHALT EGTPVDMQNC MESRGGYWCR IATVDRPRIS GWVDGRYVVK TGGDPPGMIG GVPVDPVIEL PVGKGQGGKG QGGKGQGGQG SSWQNNGSGY ANPFGNSQSG AGGNSDE
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