| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3768 |
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| Symbol | |
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| ID | 7388224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3135958 |
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| End bp | 3137487 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652540 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550721 |
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| Protein GI | 222149764 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGGGGACA GGTCCATGTT CGATTTCGGT ATCATTCCGC CAGCCATGTT TCTCGGCATG
GTGCTGTTCA TGCTGTTCGG TTTTCCGGTG GCCTTCTCGC TGGGGGCGGT TGGTTTGTTC
TTCGGCATGG TCGGCATTGC CACGGGCCAT TTCAACGAAG TGTTTCTTCA GGCCATTCCG
CTGCGGTTTT TTGGGATCGT CTCCAACGAT CTGCTGCTGG CCATCCCCTT CTTCACCATG
ATGGGCGCCA TTCTGGAACG GTGCGGGTTG GCGGAAGATC TTCTGGAGGG AACCGGCAAG
CTATTCGGTG CCGTTCCCGG TGGTCTCGCC TATGCGGTGA TTGCCGTCGG TGCCATTCTG
GGGGCGATTA CCGGCACGGT AGCAGCCTCT GTGATCACCA TGGGGATGAT CTCGCTGCCG
ATCATGCTGC GCTATGGCTA CGATCCGAAG CTGGCCACGG GGGTTATTGC GGCGTCTGGC
ACGATCACCC AGCTCATTCC GCCCTCTCTG GTTCTGGTCA TTCTCGCCGA TCAGCTGGGC
CGTTCCGTCG GTGACATGTA TCTGGGCGCT ATCGGCCCAT CGATCCTGCA AGTGGTGATT
TTCACGCTGT TCATTTTCCT GATGTCGATC TTCAAGCCTT CGAGCATGCC GCCGCTTCCC
AAAGAAGTGC GTGGAGACCT GGATTGGAGA CTGATCCGTC AGGTGCTGGC GGGCATGTTG
CCCTCCATCG TGCTGATCTT TCTGGTTCTT GGCACGATCT TCATGGGATT GGCGACGCCG
ACGGAGGCAG GCGCCCTGGG CGTGGTCGGG GCCGCCGTGC TGGCGGCCAT GCATCGCCGG
CTGACGTGGC CGCTGATCCG TCAAGCCATG CAATCCACCA TGTCGATCAC CTCGATGGTG
GTGATGATCC TGATTGGCTC CACCTGTTTC AGCCTGGTGT TCCAGGGCAT GGATGGCTCG
CGCTGGATCG AGCATATGCT GTCGGGCCTG CCGGGCGGTC CGGTTGGTTT TTTGGTGTTT
GTCAATATGT TCGTCTTCGT ACTGGCCTTC TTTCTGGATT TCTTCGAGAT TGCCTTCATC
GTCATCCCAA TGCTGGCGCC GGTGGCGCAA TCGCTGGGCA TCGATCTGAT CTGGTTCGGT
GTTTTGCTGT GCGTCAACAT GCAGACCAGC TTCATGCATC CACCCTTCGG TTTTGCGCTG
TTTTATCTGC GCAGTGTTGC CCCGCCAGAG GTCAAGACCC GCGATATCTA TATCGGCGCC
TTGCCCTGGG TGGGCATGCA GCTTCTGTTG GTCGCGGTGG TGATTTTCTG GCCGCAATCG
GTCACCATGT GGCTGGAAAA AGCCAAGGAT ATCGACCTGA ATTCGGTGAA AATCGAGGTG
CCCGGCTTTG GTGCCGGGAG CGGTATGAGC CTGCCGCCGA TTGGCGATAG CGGTGCGCCC
GGCCTGAATT TCGGCACGCC ACCCTCGCTT GGTGGTGCGC CTGCTGCCAA GCCGGGTATC
GATCTCAGCC AGCCGCCAGC TTTTAAATGA
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| Protein sequence | MGDRSMFDFG IIPPAMFLGM VLFMLFGFPV AFSLGAVGLF FGMVGIATGH FNEVFLQAIP
LRFFGIVSND LLLAIPFFTM MGAILERCGL AEDLLEGTGK LFGAVPGGLA YAVIAVGAIL
GAITGTVAAS VITMGMISLP IMLRYGYDPK LATGVIAASG TITQLIPPSL VLVILADQLG
RSVGDMYLGA IGPSILQVVI FTLFIFLMSI FKPSSMPPLP KEVRGDLDWR LIRQVLAGML
PSIVLIFLVL GTIFMGLATP TEAGALGVVG AAVLAAMHRR LTWPLIRQAM QSTMSITSMV
VMILIGSTCF SLVFQGMDGS RWIEHMLSGL PGGPVGFLVF VNMFVFVLAF FLDFFEIAFI
VIPMLAPVAQ SLGIDLIWFG VLLCVNMQTS FMHPPFGFAL FYLRSVAPPE VKTRDIYIGA
LPWVGMQLLL VAVVIFWPQS VTMWLEKAKD IDLNSVKIEV PGFGAGSGMS LPPIGDSGAP
GLNFGTPPSL GGAPAAKPGI DLSQPPAFK
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