| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3758 |
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| Symbol | glgP |
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| ID | 7388216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3122436 |
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| End bp | 3124904 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652532 |
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| Product | glycogen phosphorylase |
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| Protein accession | YP_002550713 |
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| Protein GI | 222149756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA CTCATCCAAA GGCCGATCTT CCCCTTCCAA CACCCCGCGT CTCCAATCCG
GAAACGCTTG CCGCCGAAAT CATCGAGCGG CTGACCTATG GTATCGGCAA GGATGCGAAG
GTTGCCAAGC CGCATGACTG GCTGACCGCC ACCATCCTGG TGGTGCGTGA CCGCATTATC
GACAAGTGGA TGGAATCCAC CCGCCAGACC TATGCCACAA ATGCCAAGCG GGTCTATTAT
TTGTCGCTGG AGTTTCTGAT CGGCCGGTTG ATGCGCGATG CGATGACCAA TCTCGGTCTG
GTCGAGGAGA TCAAGGCAGC GCTGGAATCG CTCGGCGTCG ATCTTGGCAT CATCGCCGGG
CTGGAGCCCG ATGCGGCGCT GGGCAATGGC GGACTTGGCC GTCTGGCTGC CTGCTTCATG
GAAAGCATGG CGACCGTAAA TATCCCGGCC TATGGCTATG GTATTCGCTA CGTCCATGGC
CTGTTTCGCC AGCAGATGGC CGATGGCTGG CAGGTGGAAC TACCCGAGAC GTGGCTCGCC
CACGGCAACC CCTGGGAATT TGAGCGGCGC GAAAGCTCCT ATGAAGTCGG CTTTGGCGGC
GGCGTCGAGA CCGCCTCGAA CGGCACCAGC GGCGAGGAAA TCCGCCACGT CTGGAAGCCA
AGCGAGCGGG TGATTGCCAC TGCCTATGAC ACGCCGATCG TCGGCTGGCG CGGCGAGCGC
ATCAACACAT TGCGTCTATG GTCGGCCCAG CCGATTGACC CGATCCTGCT CGACGCCTTC
AATGCAGGCG ACCATATTGG TGCGTTGCGT GAAAGCAACC GGGCCGAAAG CCTGACCCGT
GTTCTCTACC CGGCCGATGC GACCGCCGCT GGCCAGGAAT TGCGATTGCG GCAGGAATAT
TTCTTCTGCT CGGCCTCGCT ACAGGACATC GTCCGGCGTC ATCTCCAGCA CGGCAATGCG
CTGATCGACC TGCCAAAAAA GGTGGCGATC CAGCTCAACG ACACCCATCC TGCCGTCTCT
GTCGCTGAAC TGATGCGGCA ATTGACCGAC GTCCATGGCA TGGATTTCGA CACCGCCTGG
GATGTGACCC GCGAGACCTT CTCCTATACC AACCACACGC TGCTGCCCGA AGCGCTGGAA
AGCTGGCCGG TACCGCTGTT CGAGCGGCTG TTGCCGCGCC ATATGCAGCT GGTCTACGCG
ATCAACGCCA AATGCCTGGT GGAAGCGCGC AAGCAGAAGA ATTTCACCGA TCTGGAAATT
ACCAGCCTGT CGCTAATCGA TGAAAGCGGC GACCGCCGGG TGCGGATGGG CAATCTGGCC
TTCATGGGCT CCCATTCGAT CAACGGCGTC TCGGCCCTGC ATACCGAGCT GATGAAGGAA
ACGGTGTTCG CCACCCTGCA CAAGCTCTAC CCGGACCGGA TCAACAACAA GACCAATGGC
ATCACGCCTC GTCGCTGGCT GATGCAGTGC AACCCCGGCC TGACCTCGCT GATCCGCGAA
GCCATCGGCG ACGACTTCCT CGACGACGCC GAAAAGCTGA CCGCGCTGGA TGCCTTTGCC
AAGGACAGCG CCTTCCAGCA AAAATTTGCC GCCGTCAAGC GGGCCAACAA GGAGCAACTG
GCCAATCTGG TTGCCAGCCG CATGGGCATC AGGCTTGACC CTTCGGCGAT GTTCGACATC
CAGATCAAGC GCATCCACGA ATACAAGCGC CAGCTCTTGA ACATCATCGA GACCGTGGCG
CTGTATGACC AGATCCGCTC GCATCCGGAA CGCGACTGGG CACCGCGCGT CAAGTTGTTC
GCTGGCAAGG CGGCACCGAG CTATCACAAT GCCAAGCTGA TCATCAAACT GGCCAATGAC
GTGGCGCGGG TCATCAACAA TGATCCCTCG GTGCGCGGCC TGCTGAAAGT GGTGTTCATT
CCCAATTACA ATGTGTCGCT GGCCGAGGTC ATGGTGCCAG CAGCCGATCT CTCCGAACAA
ATTTCCACCG CCGGCATGGA AGCATCGGGA ACCGGGAACA TGAAGTTCGC GTTAAACGGT
GCGCTGACCA TCGGCACCCT GGATGGGGCC AATGTGGAAA TGCGCGATCA CGTCGGAGAA
GACAATATCT TTATCTTTGG AATGACTGCG GAAGAGGTCG GCAAGGTACG TGCCGAGGGG
CACACCCCGC GCCCGATCAT CGAACGGTCG CGCGAACTGT CCCAGGCGCT GGCCGCCATT
GCGTCCGGCG TGTTCTCGCC TGACGATCGG GACCGGTTCG CCAGCCTGGT GGATGGGCTC
TATAACCATG ACTGGTTCAT GGTGGCTGCC GATTTCGATG CCTATGCCAC AGCCCAACGT
CAGGTGGACG CGGTCTGGAC CAACCAGTCC CTCTGGCAAT CCAAAGCCAT TCTGAATACG
GCCCGCATGG GCTGGTTCTC CTCCGACCGG ACGATCAGAC AGTATACGGC CGACATCTGG
AGAGCCTGA
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| Protein sequence | MNETHPKADL PLPTPRVSNP ETLAAEIIER LTYGIGKDAK VAKPHDWLTA TILVVRDRII
DKWMESTRQT YATNAKRVYY LSLEFLIGRL MRDAMTNLGL VEEIKAALES LGVDLGIIAG
LEPDAALGNG GLGRLAACFM ESMATVNIPA YGYGIRYVHG LFRQQMADGW QVELPETWLA
HGNPWEFERR ESSYEVGFGG GVETASNGTS GEEIRHVWKP SERVIATAYD TPIVGWRGER
INTLRLWSAQ PIDPILLDAF NAGDHIGALR ESNRAESLTR VLYPADATAA GQELRLRQEY
FFCSASLQDI VRRHLQHGNA LIDLPKKVAI QLNDTHPAVS VAELMRQLTD VHGMDFDTAW
DVTRETFSYT NHTLLPEALE SWPVPLFERL LPRHMQLVYA INAKCLVEAR KQKNFTDLEI
TSLSLIDESG DRRVRMGNLA FMGSHSINGV SALHTELMKE TVFATLHKLY PDRINNKTNG
ITPRRWLMQC NPGLTSLIRE AIGDDFLDDA EKLTALDAFA KDSAFQQKFA AVKRANKEQL
ANLVASRMGI RLDPSAMFDI QIKRIHEYKR QLLNIIETVA LYDQIRSHPE RDWAPRVKLF
AGKAAPSYHN AKLIIKLAND VARVINNDPS VRGLLKVVFI PNYNVSLAEV MVPAADLSEQ
ISTAGMEASG TGNMKFALNG ALTIGTLDGA NVEMRDHVGE DNIFIFGMTA EEVGKVRAEG
HTPRPIIERS RELSQALAAI ASGVFSPDDR DRFASLVDGL YNHDWFMVAA DFDAYATAQR
QVDAVWTNQS LWQSKAILNT ARMGWFSSDR TIRQYTADIW RA
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