Gene Avi_3687 details

Gene Information

• Locus tag: Avi_3687
• ID: 7388084
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3054718
• End bp: 3055503
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643652481
• Product: hypothetical protein
• Protein accession: YP_002550663
• Protein GI: 222149706

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.145402
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTCTG TTCGTTTGTT CATTCACCTG ATTCTCACGT CCTGTATTCT GGTTGCCAGC 
GCCCTCGCCG GGCCTGCCGC CACGACGTAT GCGCAGGATA GGCCAGGTGC TGCACCCAGC 
CAGCCTATGC CGCCTGCCCT GCCCTTCACG CCGGACCCTC AAAAGCCTGA GCCGAACCAT 
CCTCAGACGG GTGAGCCAAG AGCGGACAAG GATGGCCAGC CGCCATCTTC TCAACAGCAA 
GGCCAATCTC CGCAGCAGGG CGAGGTCGAA CGACTGGAAG ACCGTAGCGA CACAGCGGCG 
CTGTCTGGCA AGCCTGCGGA CGAATTGCTG ACCCAGTTGA AACGCGAACG CCAGCCGGAA 
GCAGCCAAGG CGATTGCCGC TGCCGTGATG GCGGATTGGT CGAATTCCGG CAGCCCAACC 
GTTAATCTGC TGATGCAATG GGCCGACAAG GCCATCAAGG ACAAGAAGAA CGCCGCAGCG 
CTGGACTTCC TCGATCAGGC GATCGTGCTG GAGCCCAATT ATGCCAATGG CTGGGGGCAC 
CGCGCCAGCC TGCATTATAG CCAGGGCAAT TATCGCAAGG CGATTTCCGA TCTCAATCAC 
GTCCTGGCCA TCGAACCGCG CCATTTCGGG GCGCTGGAAA TGCTCGCCAA TATCCTGGCC 
GAGACCGGCA GCGACCAAAA GGCGCTGGAA GCGTGGCAGC GCTACCTCGC CATCTATCCC 
GCCGACCGCG CCGCCCAGAA GACCGTGACC GAGCTTTCGG AGAAACTGGC AGGCGCCCGG 
ACGTAA 

 

Protein sequence

MRSVRLFIHL ILTSCILVAS ALAGPAATTY AQDRPGAAPS QPMPPALPFT PDPQKPEPNH 
PQTGEPRADK DGQPPSSQQQ GQSPQQGEVE RLEDRSDTAA LSGKPADELL TQLKRERQPE 
AAKAIAAAVM ADWSNSGSPT VNLLMQWADK AIKDKKNAAA LDFLDQAIVL EPNYANGWGH 
RASLHYSQGN YRKAISDLNH VLAIEPRHFG ALEMLANILA ETGSDQKALE AWQRYLAIYP 
ADRAAQKTVT ELSEKLAGAR T