| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3618 |
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| Symbol | tolQ |
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| ID | 7388037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3003566 |
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| End bp | 3004285 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652435 |
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| Product | protein TolQ |
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| Protein accession | YP_002550617 |
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| Protein GI | 222149660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein
[TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACAAG TAGGATTGGC AGCCGCAAGC CACGACGTCA GCCTTTGGGC CCTGTTCATG
CAGGCAGGCT GGGTCGTGAA AATCGTGATG ATCGGGCTTC TGGGCGCCTC CGTCTGGACC
TGGGCCATCG TCATCGACAA ATATGTCAGC TTCGCCAAGG CGCGCCGCCA GTTCGACCAG
TTCGAACAGG TGTTCTGGTC CGGCCAGTCG CTGGAAGAAT TGTATCGCAC GCTGGCAGAG
CGCAACAATA CCGGGCTAGC GGCCATATTC GTCTCCGCCA TGCGGGAGTG GAAGAAGAGC
TTTGAGCGCG GCGCACGTTC GCCCATTGGC TTGCAGATGC GTATCGACCG TTCGATGGAT
GTCACCATGG CGCGCGAAGC CGAACATTTC GAGGCCCGTC TTGGCTCGCT GGCCACCATC
GGTTCGGCTG GTCCCTTCAT CGGCCTGTTC GGCACGGTTA TCGGTATCAT GACCTCGTTC
CAGGCGATTG CCGGTTCGAA ATCCACCAAT CTGGCGGTCG TCGCCCCCGG TATCGCCGAG
GCGCTGCTGG CAACGGCGAT CGGTCTGGTC GCCGCTATTC CGGCCGTTAT CGCCTACAAT
AAATTTTCCG GCGAAGCGGG CAAGCTGTCC TCGCGCATGG AAGGCTTTGC CGACGAGTTT
TCCGCCATAC TGTCGCGACA GATCGATGAG AAGCTCCAGC CTCGCCAGGC GGCGGAATAA
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| Protein sequence | MEQVGLAAAS HDVSLWALFM QAGWVVKIVM IGLLGASVWT WAIVIDKYVS FAKARRQFDQ
FEQVFWSGQS LEELYRTLAE RNNTGLAAIF VSAMREWKKS FERGARSPIG LQMRIDRSMD
VTMAREAEHF EARLGSLATI GSAGPFIGLF GTVIGIMTSF QAIAGSKSTN LAVVAPGIAE
ALLATAIGLV AAIPAVIAYN KFSGEAGKLS SRMEGFADEF SAILSRQIDE KLQPRQAAE
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