Gene Avi_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3557 
Symbol 
ID7388821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2951910 
End bp2952311 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content57% 
IMG OID643652389 
Producthypothetical protein 
Protein accessionYP_002550572 
Protein GI222149615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.826917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA AGATTGCTCT TATTGTCGCC GCCGCCCTTG CTGGCTCGAT TGCAACTTCG 
GCCATGGCGC AGAATGCCAC AGTTACCGGT GCAGCCGGCG GTGCGGTTAC CGGTGCTGTT
GTTGGTGGTC CAGTCGGCGC AGCCGTTGGC GGCGTTGTCG GCGCAGTGGC TGGCACGGCT
ATCGATCCGC CACCGCCGCG TGTTGTCACC TATGTTCGCC AGCAGCCAAT GCCAGCTCAA
CCCTATGTGA CCGACCAGCA AATCGTCGTC GGTCAGCATT TACCGCGCCA GATTGTGATC
ACCCCGATCC CTGAAGATCC GACCTACGCG TATGCAATTG TCAATAATGA GCGTGTTATC
GTCGATCCGC AGTCCTATAC GGTCATTGAT ATCATTCAGT AA
 
Protein sequence
MKTKIALIVA AALAGSIATS AMAQNATVTG AAGGAVTGAV VGGPVGAAVG GVVGAVAGTA 
IDPPPPRVVT YVRQQPMPAQ PYVTDQQIVV GQHLPRQIVI TPIPEDPTYA YAIVNNERVI
VDPQSYTVID IIQ