| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3555 |
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| Symbol | |
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| ID | 7388819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2950503 |
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| End bp | 2951084 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652387 |
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| Product | NAD(P)H dehydrogenase protein |
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| Protein accession | YP_002550570 |
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| Protein GI | 222149613 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.438204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGC TCGTTCTTCA TTCCCATCCC TTGGCTGAAA GCTTCAACCG GGCGCTCTAC
CACAAGACCT GCCAAAGCCT GGAGGCAGCG GGCCATGAGG TCGATGGCTG CAATTTGTAT
GACGAGGGTT TCAACCCGGT TCTTTCGGCT GAGGAGCGGC GGATCTATCA TGATTATCCT
GACAATATTG AACCGGTGAA ATCCTATGTC GAGCGGCTGA AGGCGGCCGA AGGGCTGGTC
ATCGTCACCC CCGTCTGGAA TTTCAGCTTT CCCGCCATGT TGAGCGGCTA TTTCGACCGT
GTCTGGCTAC CGGGCGTCAC GTTCGAACTG GTCGATGGAA AACTGACGCC GACACTGCGC
CATATCCGCA AGCTGGCGGC GGTGATGACC TATGGCGCAA CACCGTTACG AGCGTTTCTT
GCGGGCAACC CGCCAAAGAA ATCCGTGACG CGCGTGATCC GCGCCCAGAT CAAGCTGGGC
GCGCCAGTCA AATTCATGGC CCATTACGAC ATGAACAATT GCACCGAGCA AAGCCGCGCC
GCTTTTCTGG ATAAGGTGGG GGGCGTGATG GGTCGGTTTT GA
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| Protein sequence | MRVLVLHSHP LAESFNRALY HKTCQSLEAA GHEVDGCNLY DEGFNPVLSA EERRIYHDYP
DNIEPVKSYV ERLKAAEGLV IVTPVWNFSF PAMLSGYFDR VWLPGVTFEL VDGKLTPTLR
HIRKLAAVMT YGATPLRAFL AGNPPKKSVT RVIRAQIKLG APVKFMAHYD MNNCTEQSRA
AFLDKVGGVM GRF
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