| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3336 |
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| Symbol | tctE |
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| ID | 7387489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2759432 |
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| End bp | 2760853 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652217 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002550401 |
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| Protein GI | 222149444 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGGC GCGGCATGAA TTTTGGTCGT GTCCGGCCCT TGCTGCGGCT GCGCCACAGC
CTGAGGGCCC AGCTTCTGGC CTGGGTGATG GTGACGCTGG TCGGCGTGAT CGGCTTCAAT
CTGTATTTTG GGCTGGTCAT GGCCCGCAGC ACTGCCAATC TGGTGACGGA TAATATGCTG
CTCGGCTCAG CACGAATGAT TGCCGAGGCG GTGCGGGTCG ATCAGGGCGG CAATGTCGAG
GTGGATATTC CACCCGCAGC GCTGGAAATC TTCGATACCG GCTTTGGCGA CCGGGTCTAT
TACCGGGTCA CGACCGCCTG GGGCAATCTG GTGTCCGGCT ATGCCGACCT GCAAACACCG
GCCCATGAGC GCCAGGGCGA GGACATGGTG TTTCGCAATC TCAATGTCCG CGCCTTGATG
CTGAACCATC CTGTGGTTGG GGTTGATTCC AGTGTAGGCA CGGAGGGCGC TGGCGTTACG
GTGACGGTGG CGGTGACGCG TTATAGCCAG CAGGCGATGC GCACCCATCT GTGGTTTTCG
AATTTTAACG GGCAGGTTCT GCTGGTTTTG GTCGCCGGGT TGGTGACGGT GCTGGGGCTC
CAGCGTGGGC TTGGCCCCGT CTTACGGCTG CGCGATGCGG TGCGCGCCCG CCGTCGTGAC
CAGTTGGAAC CTTTTGATGA GACAATCGTC CATACCGAGC TTCGTCCGCT GGTGCGGGCG
CTGAATGATT ATATGAACCG CGTGCAGCGC CAGATGGCGG CGCAAAAACG CTTCGTTGCC
AATGCCGCCC ATCAATTGCG CACGCCGCTG ACGTTGATTT CGACGCAGGC CAGCTTTGCC
GCCCGCGAAA CCGATCCGGC CCGGCGTGAA GAAGCACTGC ACGCGCTGAT CCGCAGCACA
CGGCAAGTCA CCCGGCTGGC CGAACAGTTG CTGACCCTGA CCCGCGCCGA ACCTGGCAGC
CGCGCGCCCC GCGCTGACCG CGTCGATATG GCCGACATCG CTAGACAAGT GCTGGAAGCC
CAGGCGGAAG ACGCATTGCG GCGCGGCATC GATCTCGGCC TGGAGGCGGA AGGGGCGGCC
CCCGTCACCG GCGACGCCAC CATGCTGCGC GAAATGGTCG TCAACCTGGT CGATAATGCT
CTTCGCTACA CGCCGTCCCC CGGCGTTGTG ACGGTGACAG TGGAGACGCT TGCTGACACC
GTGCAACTCA CCGTCGAAGA CAGCGGCCCC GGCATCGCCC CCGCAGAACA CGAACAGGTC
TTCGAACGCT TCTACCGCAT CATCGGCACC CAACCCGAAG GCAGCGGCCT CGGCCTTGCC
ATCGTCCGCG AAGTGGTGGA GGGCGCAGGC GGCAAGGTCA CGCTGGGGAG TGCTGCGGAG
GGCGGATTGA AGGTGGTGGT GCGGTTGCCG AGGGCGGGGT GA
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| Protein sequence | MGGRGMNFGR VRPLLRLRHS LRAQLLAWVM VTLVGVIGFN LYFGLVMARS TANLVTDNML
LGSARMIAEA VRVDQGGNVE VDIPPAALEI FDTGFGDRVY YRVTTAWGNL VSGYADLQTP
AHERQGEDMV FRNLNVRALM LNHPVVGVDS SVGTEGAGVT VTVAVTRYSQ QAMRTHLWFS
NFNGQVLLVL VAGLVTVLGL QRGLGPVLRL RDAVRARRRD QLEPFDETIV HTELRPLVRA
LNDYMNRVQR QMAAQKRFVA NAAHQLRTPL TLISTQASFA ARETDPARRE EALHALIRST
RQVTRLAEQL LTLTRAEPGS RAPRADRVDM ADIARQVLEA QAEDALRRGI DLGLEAEGAA
PVTGDATMLR EMVVNLVDNA LRYTPSPGVV TVTVETLADT VQLTVEDSGP GIAPAEHEQV
FERFYRIIGT QPEGSGLGLA IVREVVEGAG GKVTLGSAAE GGLKVVVRLP RAG
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