| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3283 |
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| Symbol | |
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| ID | 7387449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2715015 |
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| End bp | 2716058 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652179 |
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| Product | ABC transporter nucleotide binding/ATPase protein (proline/glycine betaine) |
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| Protein accession | YP_002550363 |
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| Protein GI | 222149406 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG CAGTCATCTT CGGAAATGTC GACATCATAT TCGGCGATCG GCCACAAAAG
GCACTTGCCC TGGTCGATCA GGGCCGGACA CGCGACGAGA TCAACAAGGA AACCGGCCTG
ATCCTCGGCG TGGCCAATGC CTCGCTGACT TTGAAGGAAG GCGAAATCCT GGTGCTGATG
GGCCTGTCCG GCTCCGGCAA ATCGACACTG CTGCGGGCCG TCAACGGCTT GGCGCCCGTG
GTGCGCGGCT CGGTGTCGGT TAAGTCGCGC AATGGCTTTG TTGATCCCTA CCAGGCCAGC
CGCAAGGCGT TGCGCGACCT GCGCATGCAC AGCGTCTCGA TGGTGTTCCA GCAATTCGGC
CTGCTGCCTT GGCGCAGCGT TGCCGACAAT ATCGGCTTCG GGCTGGAATT GGCGGGCGTT
GGCGAAAAGG AGCGGCGGAA AATCGTTGCC GAGCAATTGG AATTGGTCAA CCTGACGCAA
TGGGCCGACC GCAAGGTGGA CGAATTGTCC GGTGGCATGC AGCAGCGGGT CGGCCTGGCC
CGCGCCTTTG CCACCGGCGC ACCGATCCTG TTGATGGACG AACCGTTCTC GGCGCTCGAT
CCGCTGATCC GCACACGCTT GCAGGATGAA TTGCTGGAAT TCCAGCATCG ACTAAAAAAG
ACCATCCTGT TCGTCAGCCA CGATCTGGAT GAGGCCTTCC GGATTGGCAA CCGCATCGCC
ATCATGGAAA GCGGCAGGAT CATCCAATGC GGCACGCCGC AGCAGATCGT CCAGAACCCG
GCGGATCAAT ATGTCGCCGA TTTCGTGCGC AACATGAACC CGATCAGCAT GTTGACGGCG
AGAGATGTCA TGACTGCCGG TACCAGTCAC ACGCCGGGTC TCGGCGTCAC CGCCACCGCC
GCGCCGGAAA CGCCGCTGAT CGATATTCTT GACGCCATGG CCCGCCAGCC CGGCCTGGTC
GGCGTGGTGG AGAACGGCAC GGTGATCGGC GCGATCGGCG CGCAGGATGT GGTCTCGGCT
CTAACCCGGC ACCGCCAGAC CTGA
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| Protein sequence | MSDAVIFGNV DIIFGDRPQK ALALVDQGRT RDEINKETGL ILGVANASLT LKEGEILVLM
GLSGSGKSTL LRAVNGLAPV VRGSVSVKSR NGFVDPYQAS RKALRDLRMH SVSMVFQQFG
LLPWRSVADN IGFGLELAGV GEKERRKIVA EQLELVNLTQ WADRKVDELS GGMQQRVGLA
RAFATGAPIL LMDEPFSALD PLIRTRLQDE LLEFQHRLKK TILFVSHDLD EAFRIGNRIA
IMESGRIIQC GTPQQIVQNP ADQYVADFVR NMNPISMLTA RDVMTAGTSH TPGLGVTATA
APETPLIDIL DAMARQPGLV GVVENGTVIG AIGAQDVVSA LTRHRQT
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