| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3183 |
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| Symbol | acoR |
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| ID | 7388123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2637324 |
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| End bp | 2638280 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652107 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002550291 |
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| Protein GI | 222149334 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.123295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGTCG GTTATAAACA TGCCGATACG GTCTATTCGA CTGCGTTGCA GGGATCGAAG
GCGGCCAGGT CGCCGATTGC CGCCTCCTGG CGGCGCTGCC TTGATGTCCA CGGGCTAGAC
CCTGAACAGG CGGCCATGCC GCGCACCCTG GACGCGGCGG CTTTCCGTGA TGCGCGCCAA
CGTATGGATC ACCTGATTGC CGCCAGCGCG GAGGAATTGG ACCGGCTGTT TTCGACGGTC
GGGCGCTCCG GCTGCTGCCT AGTGCTGGCT GACAGCCATG GTGTGGTGCT GGAACGCCGC
AGTGCTGCGG GCGATGACGG TGATTTTCGC AGGCTTGGCC TTTGGCAGCA GACGGAATGG
AGCGAAGCCA GCGTCGGCAC CAATGGCATC GGCACGGCGC TGGCTGACGA GCGCCCGGTC
ATCATCCACC GCGACCAGCA TTTTCTCTCC GCCAATATCG CACTGAGTTG CACCACGGCG
CCAATCCGCG ACCATCGCGG CCAGATTGCC GCCGCGCTCG ACATTTCCAC CTGCCGCCAT
GATGTGACGG ATCTGTCGAT GACCATTCTC GCCCAGGCGG TGCGCGATGC AGCACTCCGT
GTTGAGGTCA ACCTGTTTCG CATGGCCTTT GCGGGTGCGC GCATCGTCAT GATCCCCACG
GTCGCCAATC CCACGGCACT TTTGGCCGTT GACGGTGACG ATCTGGTGTT GGGCGCGACG
CGAGCAGCGC GGTTGGCGTT GCAGATCGAC GATCAGGCCA TCGCCGCCGG CCTGCCCGCT
GCCGATGCCT TGAAGGAAAA GCGCGGGGAA GAGGGGGATG ATCTGCATGA AGCGGAACGA
GCGGCGTTGC GTCGGGTTCT GTCGCGTACC AAAGGCAATG TCTCCCAGGC GGCACAATTG
CTGGGCATCA GTCGCGCAAC CCTGCATCGC AAGATGAAGC GTTTTAATAT TCACTAA
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| Protein sequence | MSVGYKHADT VYSTALQGSK AARSPIAASW RRCLDVHGLD PEQAAMPRTL DAAAFRDARQ
RMDHLIAASA EELDRLFSTV GRSGCCLVLA DSHGVVLERR SAAGDDGDFR RLGLWQQTEW
SEASVGTNGI GTALADERPV IIHRDQHFLS ANIALSCTTA PIRDHRGQIA AALDISTCRH
DVTDLSMTIL AQAVRDAALR VEVNLFRMAF AGARIVMIPT VANPTALLAV DGDDLVLGAT
RAARLALQID DQAIAAGLPA ADALKEKRGE EGDDLHEAER AALRRVLSRT KGNVSQAAQL
LGISRATLHR KMKRFNIH
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