Gene Avi_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3166 
SymbolenvZ 
ID7388109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2622390 
End bp2623712 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content60% 
IMG OID643652093 
Producttwo component sensor kinase 
Protein accessionYP_002550277 
Protein GI222149320 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.190437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCGCTGGT TCAGCCGCTG GCTGCGCCGC CAGTTTCCGA CCGGCCTGTT TGCCCGTGCC 
CTGCTGATCA TCATCCTGCC GATGCTGATC CTCCAGACCG TCTTGCTGTT CGTGTTCATG
GAGCGCCACT GGCAGATGGT GACGCAACGC CTGTCCGCCG CCGTCACCCG TGACATTGCC
ACGGTGATCG TCTTGCTTGA AACCTATCCC CAGGACGCAG CCAACACGCT GAAAATTGCC
AATTCCAAGC TGGGTCTGGT CGCCTCGCTG GAAAAGAACG GCGAATTGCC CGCCCCTCGC
CCCAAGCCAT TCTTTTCGAT TCTCGATCAA TTGCTCAGCG ATGAATTGCG CAACCAGATC
AAGCGGCCCT TCTGGATCGA TACCGTCGGC GATTCGCCGT TGATCGAGAT CCGTATCCAG
TTGAATGGCG AGGTTCTGCG GATTTTCGCC CGGCGCAACC AGGCCTATGC CTCCAATACT
CATATCTTCC TGTTGTGGAT GTTCGGCACG TCGCTGGTGC TGATCGTCAT CGCCACACTG
TTCCTGCGCG GCCAGATCCG CCCGATCCTG TCGCTGGCCG AGGCTGCCGA AAGCTTTGGC
AAGGGGCAAA AACCCGCCAA GGACTTCAGC CCACGCGGAG CCGATGAAAT CCGCCGGGCA
GGTCTCGCCT TCATTCTGAT GCGCGAGCGG ATCGAGCGGC AGATGGAACA GCGCACCGCC
ATGCTGACCG GCGTCAGTCA CGACCTGCGC ACCATCCTCA CACGGTTCAA GTTGCAATTG
GCGCTAGCGG GCGACAATCC CGATCTTGAA CCGTTAAATG AAGATGTCGA GGCCATGCAA
TCCATGCTCG AAGGCTATAT GGCCTTTGCC AAGGGTGAGG CCGAGGAGAA TTTCGGCCCC
TTCAGCCTGA AGGACATGCT GGAGAAAATC AGCGCCGATT ACCGGCTGCA CGGCAAGACC
TTCAGCTATG TGATTGAGGG TGACGAGCAG ATTCGGGTGC GTCCCAATGC CTTCTGGCGG
CTGGTGGGCA ATCTTGCCGC CAATGGCCGC CGCTATGCCA ATACCATGCA TGTCGAAGCC
CGCCACGGAG CCAAATGGCT GACCATCGTC TTCGATGATG ATGGTCCCGG CATTCCCGCC
CAATCCCGCG ACGATGTGTT CAAGCCGTTT TTCAGGCTGG ATGAGGCCCG CAATCAGGAT
GCGTCAGGCA CCGGACTTGG CCTCGCCATC GCCCGCGACA TCGCCCGCAG CCATGGCGGC
AATGTCACAC TTGGCGACAG CCCACTGGGG GGCCTGCGCG CCACGATCCG TATTCCGGTT
TAA
 
Protein sequence
MRWFSRWLRR QFPTGLFARA LLIIILPMLI LQTVLLFVFM ERHWQMVTQR LSAAVTRDIA 
TVIVLLETYP QDAANTLKIA NSKLGLVASL EKNGELPAPR PKPFFSILDQ LLSDELRNQI
KRPFWIDTVG DSPLIEIRIQ LNGEVLRIFA RRNQAYASNT HIFLLWMFGT SLVLIVIATL
FLRGQIRPIL SLAEAAESFG KGQKPAKDFS PRGADEIRRA GLAFILMRER IERQMEQRTA
MLTGVSHDLR TILTRFKLQL ALAGDNPDLE PLNEDVEAMQ SMLEGYMAFA KGEAEENFGP
FSLKDMLEKI SADYRLHGKT FSYVIEGDEQ IRVRPNAFWR LVGNLAANGR RYANTMHVEA
RHGAKWLTIV FDDDGPGIPA QSRDDVFKPF FRLDEARNQD ASGTGLGLAI ARDIARSHGG
NVTLGDSPLG GLRATIRIPV