| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3156 |
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| Symbol | cspA |
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| ID | 7388105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2619353 |
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| End bp | 2619568 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643652089 |
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| Product | cold shock protein |
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| Protein accession | YP_002550273 |
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| Protein GI | 222149316 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGAAA CTGGCATTGT AAAATTCTTC AACAACGACA AAGGCTTCGG CTTTATCAAG
CCGGACAATG GCGGTGCGGA TATTTTCGTC CACATCTCCG CCGTTCAGGC TTCCGGTCTG
AACGGATTGA GTGAAAATCA AAAAGTAAGC TTCGATACGG AACCGGACCG CCGCGGCAAG
GGACCAAAGG CCGTCAATCT GCAAATCGCA GGCTGA
|
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| Protein sequence | MAETGIVKFF NNDKGFGFIK PDNGGADIFV HISAVQASGL NGLSENQKVS FDTEPDRRGK
GPKAVNLQIA G
|
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