7 homologs were found in PanDaTox collection
for query gene Avi_3069 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_3069  hypothetical protein  100 
 
 
154 aa  315  2e-85  Agrobacterium vitis S4  Bacteria  normal  0.207168  n/a   
 
 
-
 
NC_011989  Avi_3037  hypothetical protein  92.16 
 
 
153 aa  290  3e-78  Agrobacterium vitis S4  Bacteria  normal  0.670879  n/a   
 
 
-
 
NC_012918  GM21_3701  hypothetical protein  30.07 
 
 
159 aa  60.8  0.000000007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_4213  hypothetical protein  25.95 
 
 
160 aa  51.2  0.000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00178196  normal 
 
 
-
 
NC_009720  Xaut_4526  hypothetical protein  30.36 
 
 
155 aa  50.1  0.00001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3363  hypothetical protein  29.41 
 
 
151 aa  48.5  0.00003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2957  hypothetical protein  30.43 
 
 
146 aa  45.8  0.0002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.402849  n/a   
 
 
-
 
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