| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2896 |
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| Symbol | murE |
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| ID | 7386086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2419248 |
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| End bp | 2420708 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651913 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_002550098 |
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| Protein GI | 222149141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGC GAGATCTCGC CAGCGGCGAT TTTGGGGATC TGACCGGACC ACTGGATGGG
CCGGTCGGCG ACGTGGAGAT CACCGGAATA ACCGCCGACA GCCGCAAGGT TGAACCCGGC
ATGCTGTTCG TGGCTTTGCA GGGCGTTAAG GCTGATGGTG CGGGTTTCGT TGCCGATGCC
GTAGCGCGGG GCGCTGCTGC CGTGCTCTCC GGTTCTCATC TGGATATTGC CGTTCCGGCT
CTGGTCACCG ACCAGCCGCG TCATGCGTTA GCGCTTCTTG CTGCCCGCGT CTATTCCGGC
CAGCCGGAAA CCATGGTGGC GGTGACCGGC ACGGCTGGGA AAACATCGGT TGCCTCCTTC
ACCCGTCAGA TCTGGGCTTA TGCCGGGCTT GCCAGTGCGC AGATTGGCAC GACCGGGGTG
ATTTCCCCAA CCCGCAGCGA TTACGGTTCA CTGACCACGC CTGATCCGGT CGCCCTGCAC
CAATTGCTGG CAGATCTTGC GCAAGAGGGC GTGACCCACG CCGCCATGGA AGCCTCCAGC
CATGGTCTCG ACCAGAGCCG GTTGGACGGC GTGCGTCTTG CCGCTGCCGC CTTTACCAAT
CTTGGCCGCG ACCACATGGA TTATCACCCG ACCGTTGCCG ATTACATGGC CGCCAAGATG
CGCCTGTTCG ACACCCTGCT GCCCAAAGGG TCTCCAGCGG TGATCTTTGC CGATGACGAA
TGGTCGGCGG AAGCAATCCG GGTGGCAAGG CAGGCGGGTC ATGATGTGCG CACCGTTGGC
CGGGCCGGGG ATTTCCTCAG CCTGAAGCGG GTCGAGCATT TCCGCCACAA GCAGATTGCT
GAAATTCATC ATCAGGGGGC GATCTTTGAG GTTGATCTGC CGCTGGCAGG GGATTTCCAG
ATTGCCAATG CGCTGGTGTC CGCCGGTCTT GCCATTTCGA CCGGCGTCGA GGCTTCGCTT
GCCCTGAAAG CACTGGAAAA GCTGCAAGGT GCTTCGGGCC GGTTGGAGCT GGTGGGGCAG
GCGAACAGCG GCGCGCTCGC CTATGTCGAT TATGCTCACA AGCCGGATGC TTTGGAAAAG
GTGCTGACGG CGGTCAGGCC TTTTACCAGC GGCAGAATTA TCGTGGTGTT TGGCTGCGGT
GGCGACCGCG ACAAGGGCAA ACGGCCGATC ATGGGCGAGA TCGCCGACCG GCTGGCCGAT
ATTGTCATCG TCACCGATGA CAATCCACGC TCGGAAGTGG CCGCCACCAT TCGCAGTGAG
GTGATGGCAG CGACACCGAA AGGCATTGAG ATCGGGGACC GCGCCCAGGC AATTCGCGCC
GCTGTGGCAA TGCTGGCGAC TGGCGATACG CTGATTGTTG CAGGCAAAGG CCATGAAGAG
GGCCAGATTG TCGGCGCGCA GACGCTGCCG TTTTCCGATC ACGCCGAAAT CCGCAAAGCC
ATGGAGGAGT TTCACCCTTG A
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| Protein sequence | MKLRDLASGD FGDLTGPLDG PVGDVEITGI TADSRKVEPG MLFVALQGVK ADGAGFVADA
VARGAAAVLS GSHLDIAVPA LVTDQPRHAL ALLAARVYSG QPETMVAVTG TAGKTSVASF
TRQIWAYAGL ASAQIGTTGV ISPTRSDYGS LTTPDPVALH QLLADLAQEG VTHAAMEASS
HGLDQSRLDG VRLAAAAFTN LGRDHMDYHP TVADYMAAKM RLFDTLLPKG SPAVIFADDE
WSAEAIRVAR QAGHDVRTVG RAGDFLSLKR VEHFRHKQIA EIHHQGAIFE VDLPLAGDFQ
IANALVSAGL AISTGVEASL ALKALEKLQG ASGRLELVGQ ANSGALAYVD YAHKPDALEK
VLTAVRPFTS GRIIVVFGCG GDRDKGKRPI MGEIADRLAD IVIVTDDNPR SEVAATIRSE
VMAATPKGIE IGDRAQAIRA AVAMLATGDT LIVAGKGHEE GQIVGAQTLP FSDHAEIRKA
MEEFHP
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