| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2701 |
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| Symbol | accR |
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| ID | 7388363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2239252 |
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| End bp | 2240064 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651764 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002549951 |
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| Protein GI | 222148994 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.166109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATCGATA TGCATCAAAT TGATGACAAG GGGCGGCCGG TGTTGACACA AGCGGAAGAT
CGTCAGGCGA AGATTGTCGA GTTGCTGCGC GAACAGAATT TCGTCGACAT CCGTACGCTG
ACAGACCGCT TTGATATTTC GGTGGCGACC GTTCGCCGCG ACCTTGGTGA GCTTGAGGAG
GCGGGGCTCA TTCGGCGCAC CCATGGCGGT GCCGTTAATG TCAATCAGGT CGCGCAGGAT
GCAACGAACG CTGCGCGGCT TGTCTTGAAG CAGGCGGAAA AGGCCGTCAT CGCCGATGTC
GCCGCGCGCA TGGTGACCGA TGGCGACACC GTGTTGCTAG ATGCGGGTAC CACCGCGCTG
GAAGTGGCCA AGAAGCTGAC CGGGCGAAGC AGCCTGACGT TCATCTCGAA CGGGCTCGAC
ATTATTGCTG AACTGACCCG TTTCGATGGA CAGAACATCT ATTCCATCGG CGGTGAGTAT
ACGGAGACAA ATCGGTCCTT CCGTGGCCCC TTGGCGGAGC AATTCATCCG CCAGTTCAAT
GCCGATAAAC TCATTCTCAA TGCGGCCTCG ATCGATATTG ATCGTGGTCT GATCTGCACG
GGGTCGCCAC TGAACGCAAG CGTGGCCCGC GCCATGATCG AGGTGTCGAG GCGGGTGATC
GTTGTGGCGG ATCATTCAAA GTTCACAAAA TTCAGCCTTT CGGTCGTCGC GAAGATCGAG
GACGTCGGCG TCATAGTGAC CGACTCCGGC ACGAAATCCA TCATCGATGC CGCGCCTGAG
AGGCTGCGGA AGAAGTTCGT CATCGCGAAC TAG
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| Protein sequence | MIDMHQIDDK GRPVLTQAED RQAKIVELLR EQNFVDIRTL TDRFDISVAT VRRDLGELEE
AGLIRRTHGG AVNVNQVAQD ATNAARLVLK QAEKAVIADV AARMVTDGDT VLLDAGTTAL
EVAKKLTGRS SLTFISNGLD IIAELTRFDG QNIYSIGGEY TETNRSFRGP LAEQFIRQFN
ADKLILNAAS IDIDRGLICT GSPLNASVAR AMIEVSRRVI VVADHSKFTK FSLSVVAKIE
DVGVIVTDSG TKSIIDAAPE RLRKKFVIAN
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