| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2687 |
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| Symbol | pcm |
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| ID | 7388353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2228948 |
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| End bp | 2229571 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651754 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_002549941 |
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| Protein GI | 222148984 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.451556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGGACG GCCAAATTCG AACGACGGAT GTAACCTCTC ATTCCGTGCT TTCGGCTTTT
CTGTCCGTAC CACGGGAAGC CTTTGTGCCG GACAATCTGA AAGCCCTGGC TTATATCGAT
GAGGATATTC AGGTCGCTCC TGGCCGCTAT CTGATGGATC CGTCGCCGCT TGCCAAGCTT
TTGCAGCTGG CTGAAATTGG CCGCAGCGAA CTGGTCCTGG AAATCGGAGC GGGCACCGGT
TATGTCTCGG CTTTGCTCGG ACGGCTGGCC GGTGCGGTTT TCGCCGTTGA AAGCGATGAT
CAACTGGCCA GTGCTGCAAA GTCCAATCTT GAAAAGCTGG GCGCTGCGAA TGTCACGGTC
GTTCAATGTC CGCTGGAGGC TGGCTATGCC AAAGAAGCTC CTTACGATCT GATTTTCCTG
AGTGGGTCGG TCGAGGAAGT GCCTCCGGCA CTGTTCGATC AATTGCGTGA CGGTGGCCGT
TTGATTGGAG TGGTCGGTAG CGGCCGTGCC GTCCGTGCCC ATGTCTTCGT CAAGGCCGGT
GGTTCGGTTT CGACAAGCTC GCTTTTCAAT GCTTCGATCA AGCCGCTTCC CGGTTTTGAA
AAAGCGCGCG AATTCGTATT CTGA
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| Protein sequence | MVDGQIRTTD VTSHSVLSAF LSVPREAFVP DNLKALAYID EDIQVAPGRY LMDPSPLAKL
LQLAEIGRSE LVLEIGAGTG YVSALLGRLA GAVFAVESDD QLASAAKSNL EKLGAANVTV
VQCPLEAGYA KEAPYDLIFL SGSVEEVPPA LFDQLRDGGR LIGVVGSGRA VRAHVFVKAG
GSVSTSSLFN ASIKPLPGFE KAREFVF
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