| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2683 |
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| Symbol | valS |
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| ID | 7388350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2222633 |
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| End bp | 2225476 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651751 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_002549938 |
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| Protein GI | 222148981 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATA AGACCTATGA TTCCGCAAGC GTAGAACCGA AAATCGCCAA GGCCTGGGAT
GAGGCGGAGG CATTCCGCGC CGGTGTCAAT GCCAAACCGG GTGCGGAAAG CTTCACCATC
GTCATCCCGC CGCCGAACGT GACCGGGTCG CTGCATATGG GCCACGCGCT CAACAATACA
TTGCAGGACA TCATGATCCG CTTCGAGCGC ATGCGCGGCA AGGATGTGCT GTGGCAGCCG
GGTATGGACC ATGCCGGCAT TGCCACGCAG ATGGTTGTCG AGCGGCAGTT GATGGAAAAG
CAGCTTCCGG GCCGCCGCGA GATGGGCCGC GATGCCTTTA TCGACAAGGT CTGGGAGTGG
AAGGACGAAT CGGGCGGGTT GATCTTCAAC CAGCTGAAGC GGCTTGGCGC ATCCTGCGAT
TGGTCGCGCG AGCGCTTCAC CATGGACGAG GGCCTGTCCG AGGCGGTTCT GGAAGTCTTT
GTCACACTCT ACAAGCAGGG CCTGATTTAC AAGGACAAGC GCCTCGTCAA TTGGGACCCT
AAGCTGTTGA CGGCGATTTC CGATCTGGAA GTCGAACAGC ATGAGGTCAA TGGCAATCTC
TGGCACCTCC GCTATCCGCT GGAAGAGGGC GTGACCTACC AGCACCCCGT GGCCTTCGAT
GAAGACGGCA AGGCGACGGA ATGGGAGACC CGCGACTATC TGGTGGTCGC CACGACGCGT
CCGGAAACCA TGCTGGGCGA TACCGGCATT GCCGTTCATC CCGATGACGA GCGCTATCAG
TCGATCATTG GCAAGCATGT GATCCTGCCG ATCGTTGGCC GCAGAATTCC TATTGTCGGT
GACGAATATC CCGATCCGAC GGCCGGTACG GGTGCTGTAA AAATGACACC CGCCCATGAC
TTCAACGACT TTGATGTTGG CAAGCGCGCG GGCCTGAGGA TGATCAACAT CCTCAATATC
GATGCGACCG TGACCATTGT CGAAAATGAC GATTTCTTGG AGGGACTGAC CCCAAGCCGT
GAACAGCAGA TGGTTTGGGC CGAGCTTGAA GGCCAGGAGC GGTTCTTCGT CCGCAAGAAG
ATCGTCGAGA TCTTCGAGGC GGAAGGGCTG CTTGATAAGA TCGAGCCGCA TAAACACACA
GTGCCGCATG GCGACCGAGG CGGCGTGCCA ATCGAACCGC GCCTGACCGA GCAATGGTAT
GTGGACGCCA AGACGCTGGC CAAGCCCGCC ATCGACAGCG TGCGCGAGGG CCGTACCAAA
TTCGTGCCGA AGAACTGGGA CAAGACCTAT TACGAATGGA TGGAGAATAT CCAGCCATGG
TGCGTGTCTC GTCAGCTCTG GTGGGGACAC CAGATTCCGG CCTGGTATGG TCCGGATGGT
CAGGTCTTCG TCGAAAAGGA CGAGGAAACG GCGCTTCACG CCGCCATTCA ACATTATCTG
TCGCATGAAG GGCCGATGAA GGCTTTCGTG GAAGACAAGA TCGAAAACTT TAAACCGGGC
GAAATCCTCA CCCGCGATGA AGACGTGCTC GATACCTGGT TTTCCTCGGC GCTCTGGCCG
TTCTCGACGC TTGGCTGGCC GGAAAAAACA CCGGAAGTGG CGCGCTATTA TCCGACCAAT
GTGCTCGTCA CCGGCTTTGA CATCATCTTC TTCTGGGTTG CCCGGATGAT GATGATGAGC
CTGCATTTCA TGAAGGATGA AGCGGGCAAT CCCGTCGAAC CATTTGAAAC CGTTTATGTC
CACGCGCTGG TGCGTGACAA GAACGGTCAG AAAATGTCGA AATCCAAGGG CAATGTCATC
AATCCGCTGG AGCTGATCGA TGAATATGGC GCCGATGCGC TGCGCTTCAC GCTGACCATC
ATGGCCGCCC AGGGCCGCGA TGTGAAGCTC GATACGGCAC GCGTTGCCGG CTATCGCAAT
TTCGGCACCA AGCTGTGGAA CGCCACCCGC TTTGCCGGGA TGAACGGTGT GAAGTCCGAT
CCATCCTTCC TGCCGGAAGC GGCGACTCTG GCCATCAACC GCTGGATTTT GACGGAACTG
ACGCGGGCTG AACGCGAGGT CACGGAGGCC ATCGCGCATT TCCGGTTCAA TGATGCGGCC
AGCGCGCTTT ATCGCTTTGT CTGGAACCAG TTCTGCGACT GGTATCTGGA ATTGCTGAAG
CCGGTCTTTG CCGGTGAAGA CGAGGTTGCC AAGACTGAAG CTCAGGCGTG CGCTGCCTAT
GTGCTGGAGC AGACCTACAA GCTGCTGCAC CCCTTCATGC CGTTCATGAC GGAAGAATTG
TGGGCGCATA CCGCAGGTGA GGGTGTCGAG CGCGACACGT TGCTGTGCCA TGCCGATTGG
CCGGTTCTGA CCTTCAACGA TGAGCAGGCG GCGGCCGATA TCAACTGGCT GGTGGATCTG
GTCAGCGGCA TTCGCTCGGC CCGCGCGGAA ATGAATGTGC CGCCTTCCGC CGTCGCACCG
CTCACAGTCG TTGGCGCTAA CGGCGTTACC CGCTCCAGGC TGGAGCACCA TGAAGCCGCC
ATCAAGCGTC TGGCGCGGGT GGGTGAGATC AGCCATGCCC CAGAAGCGCC GAAGGGTTCG
GCTCAGGTGA TCGTCGGCGA GGCCACGGCC TGCCTGCCGC TCGGCAGCCT GATCGATCTT
GGTGCTGAGC GAGCCCGGCT AGAGAAGTCC ATTGGCAAGG TTGACCAGGA TATTGAGAAG
GGGCGCAAGA AGCTCGGCAA CGAGAAGTTT GTCGCCAATG CCGATCCGGA AGTCGTCGCC
GCTGAGCGTC AGCGGCTTGC CGAACTGGAA GAGCAGCGCG GCGTGCTGGC CGTGGCCCTG
CAGCGGGTCA ACGAGGCCGG TTGA
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| Protein sequence | MLDKTYDSAS VEPKIAKAWD EAEAFRAGVN AKPGAESFTI VIPPPNVTGS LHMGHALNNT
LQDIMIRFER MRGKDVLWQP GMDHAGIATQ MVVERQLMEK QLPGRREMGR DAFIDKVWEW
KDESGGLIFN QLKRLGASCD WSRERFTMDE GLSEAVLEVF VTLYKQGLIY KDKRLVNWDP
KLLTAISDLE VEQHEVNGNL WHLRYPLEEG VTYQHPVAFD EDGKATEWET RDYLVVATTR
PETMLGDTGI AVHPDDERYQ SIIGKHVILP IVGRRIPIVG DEYPDPTAGT GAVKMTPAHD
FNDFDVGKRA GLRMINILNI DATVTIVEND DFLEGLTPSR EQQMVWAELE GQERFFVRKK
IVEIFEAEGL LDKIEPHKHT VPHGDRGGVP IEPRLTEQWY VDAKTLAKPA IDSVREGRTK
FVPKNWDKTY YEWMENIQPW CVSRQLWWGH QIPAWYGPDG QVFVEKDEET ALHAAIQHYL
SHEGPMKAFV EDKIENFKPG EILTRDEDVL DTWFSSALWP FSTLGWPEKT PEVARYYPTN
VLVTGFDIIF FWVARMMMMS LHFMKDEAGN PVEPFETVYV HALVRDKNGQ KMSKSKGNVI
NPLELIDEYG ADALRFTLTI MAAQGRDVKL DTARVAGYRN FGTKLWNATR FAGMNGVKSD
PSFLPEAATL AINRWILTEL TRAEREVTEA IAHFRFNDAA SALYRFVWNQ FCDWYLELLK
PVFAGEDEVA KTEAQACAAY VLEQTYKLLH PFMPFMTEEL WAHTAGEGVE RDTLLCHADW
PVLTFNDEQA AADINWLVDL VSGIRSARAE MNVPPSAVAP LTVVGANGVT RSRLEHHEAA
IKRLARVGEI SHAPEAPKGS AQVIVGEATA CLPLGSLIDL GAERARLEKS IGKVDQDIEK
GRKKLGNEKF VANADPEVVA AERQRLAELE EQRGVLAVAL QRVNEAG
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