| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2663 |
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| Symbol | pcm |
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| ID | 7386655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2204248 |
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| End bp | 2204901 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651735 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_002549922 |
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| Protein GI | 222148965 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.581006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAATCCG CAATGCTTGA AAAAGAAGGC TTTGCAGCCC TGGTATTGCG GCTGCGCTCC
GAGGGGATTT CCGACATCAA CCTGCTGACC GCGGTGGAAC AGACGCCACG CTCGCGCTTC
GTCGCCCATC ATCTGGCCGA ACATGCCTAT TCCCGCCAGA CGATCCCGCT TGAATGCGGT
GCTTTCATGG AAGGGGCCGA TCTTGCCGTC CGGCTGATCG AGAGGCTGCG GGTCAAGCCC
GGCCAGCGGG TGATGGAGGT CGGCACCGGC AGCGGGTTCA TGACCGCTGT TCTGGCGCGG
CTTTGCGAAC GTGTCGTCTC GGTGGAACGC TACAAGACGC TGGTCAACGA TGCGCAGTCG
CGTCTCGAGC AATTGTCAGT CCGCAATGCG ATTATTCGTC ATGGCGATGG CAGCCTGGGC
TTGCCGGGCG AGGGGACATT CGACCGAATC ATCGCGACCG CCGCGTTTCC GTCGATGCCA
AAAGTCTTTA CCGAGCAACT CGTTCATAAC GGGGTGCTGC TGGCTCCGTT GATTTTGGAC
GAAAATCGAT GCGTCATGGT GCGGCTCACC CGGACGGGCA GCCGGTTTGA GCGGGAAGAC
CTGTTCGAGG TTCCCTATCT TCCCCTGACC CCGAATGTTG CTGCCTTCCT CTGA
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| Protein sequence | MKSAMLEKEG FAALVLRLRS EGISDINLLT AVEQTPRSRF VAHHLAEHAY SRQTIPLECG
AFMEGADLAV RLIERLRVKP GQRVMEVGTG SGFMTAVLAR LCERVVSVER YKTLVNDAQS
RLEQLSVRNA IIRHGDGSLG LPGEGTFDRI IATAAFPSMP KVFTEQLVHN GVLLAPLILD
ENRCVMVRLT RTGSRFERED LFEVPYLPLT PNVAAFL
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