Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2617 |
Symbol | |
ID | 7386620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2166250 |
End bp | 2166642 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643651700 |
Product | transcriptional regulator MerR family |
Protein accession | YP_002549887 |
Protein GI | 222148930 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0874214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTGA AAAAATCTTA CAGCATCACC GAGTTGACCC GAGAATTCGG CGTATCGACC CGCACTCTTC GTTTCTACGA GGACGAGGGA TTGATTCAGC CGGAACGCAA GGGCCGTACC CGTGTCTACC GGGGTGCCGA CCGCCATCTT CTCAAAGAAA TTCTGCGTGC TCGTCGCATC GGCTTTACGG TAGCAGATAT TCGCGAAATC ATCCATGTCT ATAAGCAGCC GCCGGGCGAG ATCGGCCAAT TGAAGCTGAT GATGAAGCGC ATCGATGAAA AGCGTGACGA TTTGCGCCAG AAGCGCAAGG ATATCGACGA GACCCTTGCG GAACTGGATC AGGCCGAGGA GGCCTGCCTG ACCCGTCTGG TGGAAATTGG TGTCGGTTCA TAG
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Protein sequence | MALKKSYSIT ELTREFGVST RTLRFYEDEG LIQPERKGRT RVYRGADRHL LKEILRARRI GFTVADIREI IHVYKQPPGE IGQLKLMMKR IDEKRDDLRQ KRKDIDETLA ELDQAEEACL TRLVEIGVGS
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