Gene Avi_2596 details

Gene Information

• Locus tag: Avi_2596
• ID: 7386605
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2145169
• End bp: 2145864
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643651684
• Product: dolichyl-phosphate mannose synthase
• Protein accession: YP_002549872
• Protein GI: 222148915

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.406323
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATGTA TCGTACCCCT TGCCGGGCCT GATTTGTGGA CCCCGAAATA TGGCTTTAGA 
CCGCTGGTGG ATCTCAGCGG AAAACCGCTG ATCGACGCTG CCTTGGGTGA CAGGGCGTGG 
TCGAACCGGC TTCGGCCAGA GGATTACATC TTCGTCATCC GCGAGGTTCC AAACCTCGCG 
GAGCTTGTTG AATATCTGCG CCTGAAATGG CCCGGCTGCC GCATCGTGAC ACTCTCCGAC 
CTGACCGGAG GCGCCCTGTT CTCCGTGCTG GCAGCAATGG CGCTCGTCGC GCCAGACGAG 
CCCGTCATCA TCGATCTGGC CGACATCCTG TTCGCAAGCG GACCTGATGA TCCGGAGACC 
CTGTTTTCGA CAGAAGGATG TGGGGCAGTC GTGCCGGTCT TTGCCTCAAG CGAAAACTGC 
TACAGCTATT TGAAGATGAC TGACGGCGTG GTGGTTGAAG CGCGGGAAAA ACAGGTGATC 
TCGGAAAACG CCTCCGCAGG CGTATACATG TTCCGAAACA TCCAGATATT CCTCAGTGCA 
GCCGGTCACA ATATCAACAA CCGCCAGACC ATGAGCTATA AAGGCGTGCT TTTCATCTGC 
CCCATGGTCA ACGGCGTCAT CGCTGACGGC CACACCGTGC TGGCACCCCA TATTGAAAAC 
TGCCAGCCCG TGGGAAAGAT TTTTCACGAA CGATAG 

 

Protein sequence

MKCIVPLAGP DLWTPKYGFR PLVDLSGKPL IDAALGDRAW SNRLRPEDYI FVIREVPNLA 
ELVEYLRLKW PGCRIVTLSD LTGGALFSVL AAMALVAPDE PVIIDLADIL FASGPDDPET 
LFSTEGCGAV VPVFASSENC YSYLKMTDGV VVEAREKQVI SENASAGVYM FRNIQIFLSA 
AGHNINNRQT MSYKGVLFIC PMVNGVIADG HTVLAPHIEN CQPVGKIFHE R