| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2537 |
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| Symbol | clpA |
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| ID | 7385896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2090601 |
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| End bp | 2093093 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651639 |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_002549827 |
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| Protein GI | 222148870 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.287318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGACCGTGC CAACATTTTC TCCGAGCCTG GAAAAGGCGC TGCATCAGGC ACTGACTTTT
GCCAATGAGC GCCACCACGA ATACGCAACG CTTGAACATT TGCTGATGGC ACTGATCGAT
GATGCCGATG CCGCCGCCGT GATGGGCGCC TGCAATGTGA ACCTCGATAC GCTGCGCAAG
ACCGTGAGCG ATTACGTCGA TAATGAGCTG GCCAATCTGG TGACCGGTTA TGATGAGGAT
TCCAAACCCA CCTCCGGCTT CCAGCGAGTC ATCCAGCGGG CTGTCATCCA TGTCCAGTCT
TCCGGTCGGG AAGAAGTGAC GGGTGCCAAT GTTCTGGTGG CGATCTTTGC CGAGCGTGAA
AGCCATGCGG CTTACTTCCT GCAAGAACAG GAAATGACCC GCTATGATGC CGTCAACTAT
ATTTCCCACG GTATTGGCAA GCGGCCTGGC ACGTCTCAAC CTCGTCCACC GCGCGGTGTC
GAGGAAGAGA GTGAAGCCAG CCAGAAGCCG CCGCGTGAGC AGGAGGAAGG TCCGGCCAAG
AAGCAGCCGG AAGCCCTCAA GGCCTATTGC GTCAACCTCA ATGAAAAGGC CAAGACCGGC
CGGATCGATC CGCTGATCGG CCGTCACGAC GAGGTCAACC GTACCATTCA GGTCCTGTGC
CGCCGCTCAA AAAACAATCC GCTCTATGTC GGCGATCCCG GCGTCGGCAA GACGGCAATT
GCCGAAGGCC TTGCCAAGCG GATCGTTGAA GGCAAGGTGC CTGAGGCACT GGCCGATGCG
ACGATCTTCT CGCTCGACAT GGGCACGCTT CTGGCCGGTA CTCGCTATCG CGGTGATTTC
GAGGAACGCT TGAAGCAGGT GGTCAAGGAG CTGGAAGATT ATCCGGGCGC CGTGCTGTTC
ATTGATGAAA TTCATACGGT GATCGGGGCC GGGGCAACCT CCGGCGGGGC GATGGATGCT
TCCAACCTGT TGAAGCCTGC CTTGTCGTCT GGCGCGATCC GTTGCATCGG TTCGACCACC
TATAAGGAAT ATCGGCAGTT CTTCGAGAAG GATCGGGCGC TGGTGCGCCG GTTCCAGAAG
ATCGATGTCA ACGAGCCGTC CATCGATGAT GCCATCGAGA TCATGAAGGG CTTGAAGCCC
TATTTTGAGG AATATCACAA GCTGCGTTAC ACCAACGAGG CGATCAAGAC GGCTGTCGAG
CTTTCGGCCC GCTATATCAG CGACCGCAAG CTGCCGGACA AGGCCATCGA CGTGATCGAT
GAGACGGGTG CCGCGCAAAT GTTGCTGCCT GCCTCGCGTC GCCGCAAGTT GATCACCGAG
AAGGAAATCG AAGTCACCAT CGCGACGATG GCGCGGATTC CGGCCAAGAC CGTGTCCAAG
GACGATGAGT TGGTTCTTGC CAATCTCGAC AAGGAACTGC GCTCGGTCGT GTACGGTCAG
GACGATGCCA TCGAAGCGCT GTCAACGGCG ATCAAGCTGG CCCGGGCAGG GCTGCGTGAA
CCCAATAAGC CGATTGGCTC CTACGTCTTC TCCGGTCCGA CAGGCGTCGG CAAGACCGAG
GTTGCCAAGC AATTGGCCGC GTCGCTTGGC GTGGAAATGC TGCGCTTCGA TATGTCTGAA
TATATGGAGC GTCACACGGT GTCGCGTCTG CTGGGGGCCC CTCCCGGCTA TGTCGGCTTC
GATCAGGGTG GCCTGCTGAC TGATGGTGTC GATCAGCATC CGCATTGCGT CGTGCTGCTG
GACGAAATCG AAAAGGCCCA TCCTGACATC TACAACATCC TGTTGCAGGT TATGGACCAT
GGCTCGCTGA CCGACCATAA CGGTAAGAAG ATCGACTTCC GCAATGTAAT CCTGATCATG
ACCACCAATG CGGGCGCGTC GGAAATGGCC AAGTCGGCGA TCGGCTTTGG ATCTTCCAAG
CGCAGTGGTG AGGATGAAGA GGCGATCAAT CGTCTGTTCA CCCCGGAATT CCGCAATCGT
CTGGATGCGA TCATTCCGTT CGCCCCGCTG CCAAGCGAAG TGATCCACAA GGTCGTGCAG
AAGTTTGTCA TGCAGCTGGA AGCTCAGCTT TCAGAACGTG GCATCACGTT CGACCTGTCG
GAACCCGCTG TCGCCTGGTT GGCGACGCGT GGCTACGACG AGAAAATGGG CGCAAGGCCG
CTTGGCCGCG TCATTCAGGA ACATATCAAA AAGCCATTGG CCAATGAGAT CCTGTTTGGC
AAGCTGAAGA AGGGCGGGAT CGTCAAGGTC GGCACTATCA CAAAGGATGG TGACGAACAG
CTATCCCTGG ACTGCGTGGC CGATGTGGCG CCGGTCAAGC CGAAGAAGGA AGCCGAAATT
GCCGCCGTGG TGCCTGACGA TGGCGAGGTC ATCGCCAAGC CGCGTTCCAA GGCAAAAAAA
GTCGCCAAGG CTGAGCCGGA AGTTGAAGCC TTGAAGGAGA CCAAGCCGGT CGCCAAGAAA
ACCACGGTTC CAAAGGTGCC GAAAAAGAAG TAA
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| Protein sequence | MTVPTFSPSL EKALHQALTF ANERHHEYAT LEHLLMALID DADAAAVMGA CNVNLDTLRK
TVSDYVDNEL ANLVTGYDED SKPTSGFQRV IQRAVIHVQS SGREEVTGAN VLVAIFAERE
SHAAYFLQEQ EMTRYDAVNY ISHGIGKRPG TSQPRPPRGV EEESEASQKP PREQEEGPAK
KQPEALKAYC VNLNEKAKTG RIDPLIGRHD EVNRTIQVLC RRSKNNPLYV GDPGVGKTAI
AEGLAKRIVE GKVPEALADA TIFSLDMGTL LAGTRYRGDF EERLKQVVKE LEDYPGAVLF
IDEIHTVIGA GATSGGAMDA SNLLKPALSS GAIRCIGSTT YKEYRQFFEK DRALVRRFQK
IDVNEPSIDD AIEIMKGLKP YFEEYHKLRY TNEAIKTAVE LSARYISDRK LPDKAIDVID
ETGAAQMLLP ASRRRKLITE KEIEVTIATM ARIPAKTVSK DDELVLANLD KELRSVVYGQ
DDAIEALSTA IKLARAGLRE PNKPIGSYVF SGPTGVGKTE VAKQLAASLG VEMLRFDMSE
YMERHTVSRL LGAPPGYVGF DQGGLLTDGV DQHPHCVVLL DEIEKAHPDI YNILLQVMDH
GSLTDHNGKK IDFRNVILIM TTNAGASEMA KSAIGFGSSK RSGEDEEAIN RLFTPEFRNR
LDAIIPFAPL PSEVIHKVVQ KFVMQLEAQL SERGITFDLS EPAVAWLATR GYDEKMGARP
LGRVIQEHIK KPLANEILFG KLKKGGIVKV GTITKDGDEQ LSLDCVADVA PVKPKKEAEI
AAVVPDDGEV IAKPRSKAKK VAKAEPEVEA LKETKPVAKK TTVPKVPKKK
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