Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2499 |
Symbol | |
ID | 7385864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2059240 |
End bp | 2060079 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643651607 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002549795 |
Protein GI | 222148838 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGTCCAAC CTGGAGAAGG GCGCATGAGC GGGCTGAAGA TCGACAATAT CTGGAAGGAA TATGGCGACC AGATCGTGCT GGAAAGCGTC TCGCTAACGG TCGCATCTCG CGCGTTCGTG GCGCTGGTCG GTCCGTCCGG CTGCGGCAAG AGCACGTTTC TGCGGATGCT GCTGGGGCAG GAACAGCCGA CACGCGGCAT TATCCTGCTG GATGGCAAGC CGCTGCCGAA GGAGCCGGGG CCGGATCGCG GCGTCGTCTT TCAGCGCTAT TCGGTATTTC CTCACCTCAC CGTGCTGGGC AATGTGCTGC TGGGTAAGGA ATTGCCCGTC TCGCTATTGG CTGGCCGCCT GTTCGGCTCT GCCCGCCGCA ATGCCGTGGA TGAGGCCCGC GCGATGATTG CCGCCGTTGG CCTTTCCGGA TCAGAGGCCA AATATCCGGC CCAGCTTTCG GGCGGTATGC AGCAACGGCT GGCGCTCGCG CAAGCGCTGA TCATGAAGCC GAAAGTGCTG CTGCTGGACG AGCCGTTCGG GGCGCTCGAT CCGGGTATAA GGGCCGAGAT CCACACGCTG ATGAAAAAGC TCTGGCATGA AAATCCGATG ACCGTCGTCA TGGTTACGCA TGACATGCGG GAGGCCTTTA CGCTGGCCAG CCGCGTTGTC GCTTTTGAGC GTCCCCGTGA CCGGCCCGAG GAAAAACAGC GCTACGGCGC CACCATCACC AAGGACATTT CCATCTGGCC ACCCCGCCAG GCGGGTACCC CTTCCATCTT TCGCCCTGAC CGGGACGGCC CGGTCGCATC CATCGGGCTT CACCGGGACG ACCCGGCACA TCGTCGATAG
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Protein sequence | MVQPGEGRMS GLKIDNIWKE YGDQIVLESV SLTVASRAFV ALVGPSGCGK STFLRMLLGQ EQPTRGIILL DGKPLPKEPG PDRGVVFQRY SVFPHLTVLG NVLLGKELPV SLLAGRLFGS ARRNAVDEAR AMIAAVGLSG SEAKYPAQLS GGMQQRLALA QALIMKPKVL LLDEPFGALD PGIRAEIHTL MKKLWHENPM TVVMVTHDMR EAFTLASRVV AFERPRDRPE EKQRYGATIT KDISIWPPRQ AGTPSIFRPD RDGPVASIGL HRDDPAHRR
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