| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2457 |
|---|
| Symbol | |
|---|
| ID | 7386081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2021474 |
|---|
| End bp | 2022457 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643651574 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_002549763 |
|---|
| Protein GI | 222148806 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0538765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCT TTTCCTATAG TCGAGCATCG TCCATACAAG CGGCGCGTGA AGCAACGCAC
CAAGCAGAAA CAGCGCTGCT GGCCGGTGGT ACGAGCTTGC TTGACCTTGC CAAATCCGGT
GTTGCGGAGC CGGATAATGT CCTCGATATA AGCCATCTGG CCGGACTTGG CACCATTACC
GTGAACGAAA CTGGAGCCAC CATTGGCACC TTGGCCAGAA TGTCCACCGT GGCCGATCAC
CCTGCCATAA AGACGCGCTA TCCAGCTGTT GCGCAATCGC TGTCTCTGGC GGCGTCGCCC
CAACTGCGCA ACATGGCGAC GGTTGGTGGC AATCTCATGC AACGCACCCG CTGTTCCTAC
TTTCGTGATC CAGGCACATT TGCAGCCTGC AACAAGCGCG CACCGGGTTC CGGCTGTTCA
GCCATCGGCG GCGTGACCCG CAACCATGCG GTATTGGGTA CCAGCGATCT CTGCATTGCC
AGCTACCCCG GCGATCTTGC CGTGGCGCTG ACCGCCTTTG ATGCCTCAGT GGATTTGGGT
GAGCGGCAGA TCGCTATCGA CGATTTCTTT TTGCCCTATG GCGATACCCC GCATCTCGAA
ACCCTGTTGA AGCCAGGGGA AATGATCCTC TCCATGACCA TTCCGGCATC TGCTGCGGCT
GAAAATTCCA CCTATCTGAA GATCCGCGAC CGCCAGTCCT ATGAATTTGC CGCAGCCAGC
GCTGCCGTTG GCCTTGAGCT GGAAGAGGAT GGCCGCACGA TCCGGGATAT TCGCATTGCG
CTTGGTGGCG TGGCCAGCAA GCCTTGGCGG GTCCGCGCCG TTGAACAGGC GCTGATCGGC
AAGCTGCTGG AGCCGCAAAC CGTCGAGCAG GCCAGCCGGC TTTCGATGGA AGGCGCGGTG
TCGCAGGGCG ATAATCACTA CAAGATCCAA TTGGCGCCGC GCGTTATCGC CCGCGCCATC
CTCACTCTGG GAGGTCTCGC ATGA
|
|---|
| Protein sequence | MKSFSYSRAS SIQAAREATH QAETALLAGG TSLLDLAKSG VAEPDNVLDI SHLAGLGTIT
VNETGATIGT LARMSTVADH PAIKTRYPAV AQSLSLAASP QLRNMATVGG NLMQRTRCSY
FRDPGTFAAC NKRAPGSGCS AIGGVTRNHA VLGTSDLCIA SYPGDLAVAL TAFDASVDLG
ERQIAIDDFF LPYGDTPHLE TLLKPGEMIL SMTIPASAAA ENSTYLKIRD RQSYEFAAAS
AAVGLELEED GRTIRDIRIA LGGVASKPWR VRAVEQALIG KLLEPQTVEQ ASRLSMEGAV
SQGDNHYKIQ LAPRVIARAI LTLGGLA
|
|---|
| |