Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2457 |
Symbol | |
ID | 7386081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2021474 |
End bp | 2022457 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651574 |
Product | oxidoreductase |
Protein accession | YP_002549763 |
Protein GI | 222148806 |
COG category | [C] Energy production and conversion |
COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0538765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCT TTTCCTATAG TCGAGCATCG TCCATACAAG CGGCGCGTGA AGCAACGCAC CAAGCAGAAA CAGCGCTGCT GGCCGGTGGT ACGAGCTTGC TTGACCTTGC CAAATCCGGT GTTGCGGAGC CGGATAATGT CCTCGATATA AGCCATCTGG CCGGACTTGG CACCATTACC GTGAACGAAA CTGGAGCCAC CATTGGCACC TTGGCCAGAA TGTCCACCGT GGCCGATCAC CCTGCCATAA AGACGCGCTA TCCAGCTGTT GCGCAATCGC TGTCTCTGGC GGCGTCGCCC CAACTGCGCA ACATGGCGAC GGTTGGTGGC AATCTCATGC AACGCACCCG CTGTTCCTAC TTTCGTGATC CAGGCACATT TGCAGCCTGC AACAAGCGCG CACCGGGTTC CGGCTGTTCA GCCATCGGCG GCGTGACCCG CAACCATGCG GTATTGGGTA CCAGCGATCT CTGCATTGCC AGCTACCCCG GCGATCTTGC CGTGGCGCTG ACCGCCTTTG ATGCCTCAGT GGATTTGGGT GAGCGGCAGA TCGCTATCGA CGATTTCTTT TTGCCCTATG GCGATACCCC GCATCTCGAA ACCCTGTTGA AGCCAGGGGA AATGATCCTC TCCATGACCA TTCCGGCATC TGCTGCGGCT GAAAATTCCA CCTATCTGAA GATCCGCGAC CGCCAGTCCT ATGAATTTGC CGCAGCCAGC GCTGCCGTTG GCCTTGAGCT GGAAGAGGAT GGCCGCACGA TCCGGGATAT TCGCATTGCG CTTGGTGGCG TGGCCAGCAA GCCTTGGCGG GTCCGCGCCG TTGAACAGGC GCTGATCGGC AAGCTGCTGG AGCCGCAAAC CGTCGAGCAG GCCAGCCGGC TTTCGATGGA AGGCGCGGTG TCGCAGGGCG ATAATCACTA CAAGATCCAA TTGGCGCCGC GCGTTATCGC CCGCGCCATC CTCACTCTGG GAGGTCTCGC ATGA
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Protein sequence | MKSFSYSRAS SIQAAREATH QAETALLAGG TSLLDLAKSG VAEPDNVLDI SHLAGLGTIT VNETGATIGT LARMSTVADH PAIKTRYPAV AQSLSLAASP QLRNMATVGG NLMQRTRCSY FRDPGTFAAC NKRAPGSGCS AIGGVTRNHA VLGTSDLCIA SYPGDLAVAL TAFDASVDLG ERQIAIDDFF LPYGDTPHLE TLLKPGEMIL SMTIPASAAA ENSTYLKIRD RQSYEFAAAS AAVGLELEED GRTIRDIRIA LGGVASKPWR VRAVEQALIG KLLEPQTVEQ ASRLSMEGAV SQGDNHYKIQ LAPRVIARAI LTLGGLA
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