| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2431 |
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| Symbol | rhlE |
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| ID | 7386060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1999946 |
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| End bp | 2001496 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651553 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_002549742 |
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| Protein GI | 222148785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAGCCAAA AAGTTCTTTC CGCTGTAACT GATGCCGGCT ACACCGTGCC GACACCAATC
CAGGCTGGCG CCATTCCGCC GGCCCTGATG CGCCGCGACA TTTGCGGCAT TGCCCAGACG
GGTACAGGCA AGACGGCGTC CTTCGTACTG CCGATGCTGA CATTGCTCGA AAAAGGCCGC
GCACGCGCAC GCATGCCGCG CACGCTGATT ATGGAGCCGA CGCGCGAACT TGCAGCCCAG
GTGGCCGAGA ATTTCGAAAA ATACGGCAAG AATCACAAGC TCAACATTGC CCTGCTGATC
GGCGGCGTTT CGTTCGATGA ACAGGACCGC AAACTGGAGC GTGGCGCCGA TGTGCTGATC
TGCACGCCTG GCCGCCTGTT GGACCATTGC GAGCGCGGCA AGCTGCTGAT GACCGGCGTC
GAAATCCTCG TTATCGACGA AGCCGACCGC ATGCTGGACA TGGGCTTCAT TCCCGATATC
GAGCGCATCG CCAAGCTCAT TCCCTTTACC CGTCAGACGC TGTTTTTCTC GGCCACCATG
CCGCCGGAAA TCCAGAAGCT GGCCGACAAG TTCCTGCAAA ATCCGGAACG GATCGAGGTG
GCTCCGCCAT CTTCGACCGC TAAGACCGTG ACGCAGCGGC TGGTGGCCTG CCAGAACAAG
GACTATGAAA AGCGCTCCAC CCTGCGTGAC ATTATCCGCG CCCAGGACGA TCTGAAGAAC
GCCATCATCT TCTGTAACAG GAAGAAGGAT GTGGCCGATC TGTTCCGCTC GCTGGAACGT
CATGGTTTTT CGGTCGGCGC CCTGCATGGC GACATGGACC AGCGTTCGCG CACCAACATG
CTGGCCGGTT TCAAGGACAA TCAGATCACC CTTCTGGTCG CTTCCGACGT TGCGGCTCGT
GGCCTTGATA TTCCTGATGT CAGCCATGTG TTCAATTTCG ACGTGCCGAT TCATGCGGAA
GACTATGTCC ACCGCATCGG CCGTACCGGC CGTGCCGGTC GCTCCGGCCG TGCGTTCACG
CTGGTGACCA AGTCCGACGC AAAATATCTC GACGCGATTG AAAAACTGAT CGGTGAAAAG
CCAGAATGGC TGGACGGCGA CGTCGCCTCT CTGCCGCCTA TGGCTGAAGG TGATCGTGAT
GAGCGCCGTG GCCGGGGCGG CAAGAATGCT CGTGACAAGA GCGGTAGTGA CAGAAACGGT
AGTGACCGGG GCCGTGGCCG GGAGCGCTCC AGAGACGGTG CGCGTGACGG TGACCGTGAA
CATCGCAGCA GTCACAAGCC TGACACGACA GAAGAGCAGA TTAGCACCGA AGCGGCTGTA
GAAGTCGTCG CAACCAAGGT GGATAGCGTG AAGCAAGAGC GCAAGACAGA CAGACGGCCA
AGCCAGGGCA ACCGCGATTA TCGCAATAAT CAGGCGCCCA ACCCGGCCAA TGACGACCAG
CGCGAACGCC GCCGCCAGCA TTACCGCGAC CATGATGACG GCCCGACACC GGTTGGTTTC
GGCGATGATA TTCCGGCTTT CATGCTGATC GTTGCCAGCG CCAAAGCCTG A
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| Protein sequence | MSQKVLSAVT DAGYTVPTPI QAGAIPPALM RRDICGIAQT GTGKTASFVL PMLTLLEKGR
ARARMPRTLI MEPTRELAAQ VAENFEKYGK NHKLNIALLI GGVSFDEQDR KLERGADVLI
CTPGRLLDHC ERGKLLMTGV EILVIDEADR MLDMGFIPDI ERIAKLIPFT RQTLFFSATM
PPEIQKLADK FLQNPERIEV APPSSTAKTV TQRLVACQNK DYEKRSTLRD IIRAQDDLKN
AIIFCNRKKD VADLFRSLER HGFSVGALHG DMDQRSRTNM LAGFKDNQIT LLVASDVAAR
GLDIPDVSHV FNFDVPIHAE DYVHRIGRTG RAGRSGRAFT LVTKSDAKYL DAIEKLIGEK
PEWLDGDVAS LPPMAEGDRD ERRGRGGKNA RDKSGSDRNG SDRGRGRERS RDGARDGDRE
HRSSHKPDTT EEQISTEAAV EVVATKVDSV KQERKTDRRP SQGNRDYRNN QAPNPANDDQ
RERRRQHYRD HDDGPTPVGF GDDIPAFMLI VASAKA
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