| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2385 |
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| Symbol | |
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| ID | 7386024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1953155 |
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| End bp | 1953784 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651517 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549706 |
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| Protein GI | 222148749 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0520514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAATG TCGAACTTCT CCTCAATGCC TTCACCACCC TGTTGGTGAC GCTGGACCCG
CCGGGCCTGG CACCGCTGTT TCTTGGCCTG ACACGCGGCA TGACCCGGCA GCAACGCAAA
CAAGTGGCCT TGCGTGGCGC GGCCATCGCC TTTGGCATCC TGGCGGTCTT TGCTGTTTTC
GGCGCCAGCA TTCTCGAAGC ACTTGGCATC TCCATCGGCG CATTCCGTAT CGCAGGCGGA
TTGATGCTAT TTGCCATCGC TTTCGAGATG ATCTTCGAAA AACGCCAGGA GCGTAAGGAA
AAGACCTCGG AAGACGCGAT TACCCGCGAT CATATGCACA ATATCGCCGT TTTCCCGCTG
GCTTTGCCGC TTATCGCTGG CCCTGGCGCC ATTTCCGCCA CCATTCTGCT GGCTGGCGCC
TTGCCCGGCC CGGTAGAGCG CACGGAACTG ATCCTGGTCA TCGGACTGTG CATTGGTGTC
GTACTGCTGG CCCTGGTGAT CGCCGACCGC CTCGACCGGT TTTTAGGTGT GACAGGCCGG
GCCATCCTAA CTCGCCTGCT CGGCGTCATC CTGGCCGCCC TATCCGTTCA ATTCGTCGTT
GACGGCATCA AATCGGCATT TCACCTTTGA
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| Protein sequence | MTNVELLLNA FTTLLVTLDP PGLAPLFLGL TRGMTRQQRK QVALRGAAIA FGILAVFAVF
GASILEALGI SIGAFRIAGG LMLFAIAFEM IFEKRQERKE KTSEDAITRD HMHNIAVFPL
ALPLIAGPGA ISATILLAGA LPGPVERTEL ILVIGLCIGV VLLALVIADR LDRFLGVTGR
AILTRLLGVI LAALSVQFVV DGIKSAFHL
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